RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 SCAMP1O15126 338 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 SOCS5O75159 536 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 GCATO75600 419 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 RFPL3O75679 317 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 JUNDP17535 347 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 CKMT2P17540 419 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 ACP1P24666 158 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 HNRNPKP61978 463 aaKnown RBP eCLIP19.25■□□□□ 0.67
COL9A2-204ENST00000427563 YPEL5P62699 121 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 MACC1Q6ZN28 852 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 LRRC49Q8IUZ0 686 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 CBARPQ8N350 705 aaPredicted RBP19.25■□□□□ 0.67
COL9A2-204ENST00000427563 GOLPH3Q9H4A6 298 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 ZMIZ1Q9ULJ6 1067 aa19.25■□□□□ 0.67
COL9A2-204ENST00000427563 ASXL3Q9C0F0 2248 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 MATN3O15232 486 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 LZTS3O60299 673 aaPredicted RBP19.24■□□□□ 0.67
COL9A2-204ENST00000427563 FZD6O60353 706 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 RECQL5O94762 991 aaPredicted RBP19.24■□□□□ 0.67
COL9A2-204ENST00000427563 PCCBP05166 539 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 CELA2BP08218 269 aaPredicted RBP19.24■□□□□ 0.67
COL9A2-204ENST00000427563 PDHA1P08559 390 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 LHCGRP22888 699 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 NIPAL4Q0D2K0 466 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 INPP5AQ14642 412 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 CNGA3Q16281 694 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 ALG1LQ6GMV1 187 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 MAP7D3Q8IWC1 876 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 PHACTR4Q8IZ21 702 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 PIH1D2Q8WWB5 315 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 FATE1Q969F0 183 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 COQ10AQ96MF6 247 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 SEMA3CQ99985 751 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 C1QTNF7Q9BXJ2 289 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 CLPBQ9H078 707 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 NLGN3Q9NZ94 848 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 OR1A2Q9Y585 309 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 KNTC1P50748 2209 aa19.24■□□□□ 0.67
COL9A2-204ENST00000427563 LRRD1A4D1F6 860 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 ZNF487B1APH4 448 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 TOR1BO14657 336 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 PGLSO95336 258 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 CPP00450 1065 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 HLA-DQB2P05538 268 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 COMTP21964 271 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 FECHP22830 423 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 CCNCP24863 283 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 HADHBP55084 474 aaKnown RBP19.23■□□□□ 0.67
COL9A2-204ENST00000427563 DSC2Q02487 901 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 C1orf61Q13536 156 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 IFI16Q16666 785 aaKnown RBP19.23■□□□□ 0.67
COL9A2-204ENST00000427563 SLC9A4Q6AI14 798 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 NPNTQ6UXI9 565 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 TSPAN33Q86UF1 283 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 ARRDC2Q8TBH0 407 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 PDCD6IPQ8WUM4 868 aaKnown RBP19.23■□□□□ 0.67
COL9A2-204ENST00000427563 HDAC11Q96DB2 347 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 MRFAP1L1Q96HT8 127 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 APOLD1Q96LR9 279 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 APOOQ9BUR5 198 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 LRRC61Q9BV99 259 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 RBM22Q9NW64 420 aaKnown RBP eCLIP19.23■□□□□ 0.67
COL9A2-204ENST00000427563 SALL4Q9UJQ4 1053 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 PPIL1Q9Y3C6 166 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 CELSR3Q9NYQ7 3312 aa19.23■□□□□ 0.67
COL9A2-204ENST00000427563 RCCD1A6NED2 376 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 NPIPB15A6NHN6 443 aaPredicted RBP19.22■□□□□ 0.67
COL9A2-204ENST00000427563 AQP9O43315 295 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 C1SP09871 688 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 ELFN1P0C7U0 828 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 VIPR1P32241 457 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 MAGEA1P43355 309 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 PEX5P50542 639 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 THOP1P52888 689 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 POLR2LP62875 67 aaKnown RBP19.22■□□□□ 0.67
COL9A2-204ENST00000427563 PTK2BQ14289 1009 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 NFATC4Q14934 902 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 ALG11Q2TAA5 492 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 DEFB133Q30KQ1 61 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 RALGPS1Q5JS13 557 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 LRRC38Q5VT99 294 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 VSIG1Q86XK7 387 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 BBS5Q8N3I7 341 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 GALNT15Q8N3T1 639 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 CNTD1Q8N815 330 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 FAM181AQ8N9Y4 354 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 LMX1AQ8TE12 382 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 NSMCE1Q8WV22 266 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 ZCCHC14Q8WYQ9 949 aaKnown RBP19.22■□□□□ 0.67
COL9A2-204ENST00000427563 RNF25Q96BH1 459 aaPredicted RBP19.22■□□□□ 0.67
COL9A2-204ENST00000427563 MCCC1Q96RQ3 725 aaPredicted RBP19.22■□□□□ 0.67
COL9A2-204ENST00000427563 LGMNQ99538 433 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 APOBEC3BQ9UH17 382 aaKnown RBP19.22■□□□□ 0.67
COL9A2-204ENST00000427563 PHTF1Q9UMS5 762 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 PCDHA13Q9Y5I0 950 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 RAI2Q9Y5P3 530 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 CSNK1G3Q9Y6M4 447 aa19.22■□□□□ 0.67
COL9A2-204ENST00000427563 TMEM8BA6NDV4 472 aa19.21■□□□□ 0.67
COL9A2-204ENST00000427563 SOWAHDA6NJG2 315 aa19.21■□□□□ 0.67
COL9A2-204ENST00000427563 HEXIM1O94992 359 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms