RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 SMTNL1A8MU46 457 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 DDX3XO00571 662 aaKnown RBP eCLIP18.59■□□□□ 0.572e-8■□□□□ 10.8
SREBF1-206ENST00000423161 CASC3O15234 703 aaKnown RBP18.59■□□□□ 0.57
SREBF1-206ENST00000423161 LRCH4O75427 683 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 PRB1P04280 392 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 RBMS1P29558 406 aaKnown RBP18.59■□□□□ 0.57
SREBF1-206ENST00000423161 PRKCIP41743 596 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 ZNF135P52742 658 aaPredicted RBP18.59■□□□□ 0.57
SREBF1-206ENST00000423161 KLHL30Q0D2K2 578 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 SPIDRQ14159 915 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 RFTN1Q14699 578 aaPredicted RBP18.59■□□□□ 0.57
SREBF1-206ENST00000423161 LVRNQ6Q4G3 990 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 IGF2-ASQ6U949 168 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 NYAP1Q6ZVC0 841 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 GKN2Q86XP6 184 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 PSTKQ8IV42 348 aaKnown RBP18.59■□□□□ 0.57
SREBF1-206ENST00000423161 PLA2G15Q8NCC3 412 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 KCNE4Q8WWG9 221 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 SLC39A7Q92504 469 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 ECHDC3Q96DC8 303 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 WDR92Q96MX6 357 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 CWC15Q9P013 229 aaKnown RBP18.59■□□□□ 0.57
SREBF1-206ENST00000423161 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 GPR34Q9UPC5 381 aa18.59■□□□□ 0.57
SREBF1-206ENST00000423161 KALRNO60229 2985 aa18.58■□□□□ 0.57
SREBF1-206ENST00000423161 A0A1W2PQC6 194 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 CFAP69A5D8W1 941 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 TK2O00142 265 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 RECQL5O94762 991 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-206ENST00000423161 ELFN1P0C7U0 828 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 HCAR3P49019 387 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 SCNN1BP51168 640 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 NSUN2Q08J23 767 aaKnown RBP eCLIP18.58■□□□□ 0.56
SREBF1-206ENST00000423161 RALGDSQ12967 914 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 DPYSQ14117 519 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 FOXR1Q6PIV2 292 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 LIPIQ6XZB0 460 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 SDR16C5Q8N3Y7 309 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 TRIM11Q96F44 468 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 PDXPQ96GD0 296 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 ZWILCHQ9H900 591 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 SCN8AQ9UQD0 1980 aa18.58■□□□□ 0.56
SREBF1-206ENST00000423161 TNFP01375 233 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 RENBPP51606 427 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 PDX1P52945 283 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 UCNP55089 124 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 TMPRSS3P57727 454 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 KIAA1024LP59773 190 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 AP1S1P61966 158 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 POLR2LP62875 67 aaKnown RBP18.57■□□□□ 0.56
SREBF1-206ENST00000423161 TMCO4Q5TGY1 634 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 KCTD16Q68DU8 428 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 DPPA4Q7L190 304 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 TP53INP2Q8IXH6 220 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 LZTR1Q8N653 840 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 WDR36Q8NI36 951 aaKnown RBP18.57■□□□□ 0.56
SREBF1-206ENST00000423161 CCDC74AQ96AQ1 378 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 PRR11Q96HE9 360 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-206ENST00000423161 SLC46A1Q96NT5 459 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 PSKH2Q96QS6 385 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 MRPL47Q9HD33 250 aaKnown RBP18.57■□□□□ 0.56
SREBF1-206ENST00000423161 SEPT3Q9UH03 358 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 PCDHGA8Q9Y5G5 932 aa18.57■□□□□ 0.56
SREBF1-206ENST00000423161 CCDC187A0A096LP49 1063 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 A0A1B0GTH6 734 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 PMS2P1A4D2B8 440 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 H3BRJ5 948 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 CACNB4O00305 520 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-206ENST00000423161 NTN3O00634 580 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-206ENST00000423161 TRAFD1O14545 582 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-206ENST00000423161 KLK10O43240 276 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 MYBL1P10243 752 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 SKILP12757 684 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 ARL4AP40617 200 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 ZNF235Q14590 738 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 LBRQ14739 615 aaKnown RBP18.56■□□□□ 0.56
SREBF1-206ENST00000423161 SMTNL2Q2TAL5 461 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 OR1E3Q8WZA6 343 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 FUBP1Q96AE4 644 aaKnown RBP18.56■□□□□ 0.56
SREBF1-206ENST00000423161 NSMCE3Q96MG7 304 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 ZNF599Q96NL3 588 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 NAP1L5Q96NT1 182 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-206ENST00000423161 RBM15Q96T37 977 aaKnown RBP eCLIP18.56■□□□□ 0.565e-9■■□□□ 11.5
SREBF1-206ENST00000423161 DPH1Q9BZG8 443 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 CPNE5Q9HCH3 593 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 RABGEF1Q9UJ41 708 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 DGKBQ9Y6T7 804 aa18.56■□□□□ 0.56
SREBF1-206ENST00000423161 ATMQ13315 3056 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 TMEM202A6NGA9 273 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 A8MX80 341 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 IL1R2P27930 398 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 PCK1P35558 622 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 ZNF165P49910 485 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 SLC10A7Q0GE19 358 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 C19orf57Q0VDD7 668 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 ACOX1Q15067 660 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 DPYSL2Q16555 572 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 ARL14Q8N4G2 192 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 LSM14AQ8ND56 463 aaKnown RBP18.55■□□□□ 0.56
SREBF1-206ENST00000423161 OR56A4Q8NGH8 313 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms