RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 BASP1P80723 227 aaKnown RBP17.07■□□□□ 0.32
COL7A1-202ENST00000422991 RALGDSQ12967 914 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 SPARCL1Q14515 664 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 SLC1A5Q15758 541 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 SYCP2LQ5T4T6 812 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 RANBP10Q6VN20 620 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 USP45Q70EL2 814 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 DPPA4Q7L190 304 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 C11orf74Q86VG3 221 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 RMDN1Q96DB5 314 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 SCRN2Q96FV2 425 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 SMIM14Q96QK8 99 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 TRIM51Q9BSJ1 452 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 GPR174Q9BXC1 333 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 PCED1AQ9H1Q7 454 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 B4GALT6Q9UBX8 382 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 ASIC3Q9UHC3 531 aa17.07■□□□□ 0.32
COL7A1-202ENST00000422991 THADAQ6YHU6 1953 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 SCN8AQ9UQD0 1980 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 CTAGE15A4D2H0 777 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 FAM187AA6NFU0 413 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 NPIPB15A6NHN6 443 aaPredicted RBP17.06■□□□□ 0.32
COL7A1-202ENST00000422991 RAD51CO43502 376 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 TSPAN6O43657 245 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 NDUFS2O75306 463 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 USP12O75317 370 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 SUN1O94901 812 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 APRTP07741 180 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 ALPIP09923 528 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 CTAGE8P0CG41 777 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 NFKBIAP25963 317 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 VIPR1P32241 457 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 HNF1BP35680 557 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 MAGEA6P43360 314 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 PPP2CBP62714 309 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 PPP2CAP67775 309 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 FAM193AP78312 1265 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 SEMG2Q02383 582 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 RPL6Q02878 288 aaKnown RBP17.06■□□□□ 0.32
COL7A1-202ENST00000422991 KCNJ11Q14654 390 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 PTPRRQ15256 657 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 TMEM52BQ4KMG9 183 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 NAPEPLDQ6IQ20 393 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 DENND5AQ6IQ26 1287 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 CCDC70Q6NSX1 233 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 NEK5Q6P3R8 708 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 MAATS1Q7Z4T9 603 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 CTAGE6Q86UF2 777 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 CTAGE4Q8IX94 777 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 NDUFAF2Q8N183 169 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 SLC25A41Q8N5S1 370 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 CEP112Q8N8E3 955 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 LRRC45Q96CN5 670 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 LYSMD1Q96S90 227 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 APOL2Q9BQE5 337 aa17.06■□□□□ 0.32
COL7A1-202ENST00000422991 C6orf106Q9H6K1 298 aaPredicted RBP17.06■□□□□ 0.32
COL7A1-202ENST00000422991 PLXNA2O75051 1894 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 ABCA7Q8IZY2 2146 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TRPM6Q9BX84 2022 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3DA0A087WVF3 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3IA0A087WXS9 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3EA0A087X179 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3KA0A087X1G2 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3FA6NER0 549 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-202ENST00000422991 PRR23AA6NEV1 266 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 FAM47DPA6NHR8 397 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3LB9A6J9 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 NEMP1O14524 444 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 MAP3K13O43283 966 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 PCDH8O95206 1070 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3HP0C7X1 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 CYP2A6P11509 494 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TPSB2P20231 275 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 LHCGRP22888 699 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 IVDP26440 423 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 LMAN1P49257 510 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 MRPS25P82663 173 aaKnown RBP17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TPSAB1Q15661 275 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TMEM259Q4ZIN3 620 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3GQ6DHY5 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3CQ6IPX1 549 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 KIAA1161Q6NSJ0 714 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 LINC00523Q86TU6 105 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TRIM69Q86WT6 500 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 TBC1D3Q8IZP1 549 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-202ENST00000422991 MMGT1Q8N4V1 131 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 NOA1Q8NC60 698 aaKnown RBP17.05■□□□□ 0.32
COL7A1-202ENST00000422991 CADM4Q8NFZ8 388 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 CPT1BQ92523 772 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 CARD6Q9BX69 1037 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 ARNT2Q9HBZ2 717 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 R4GN57 208 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 WDR87Q6ZQQ6 2873 aa17.05■□□□□ 0.32
COL7A1-202ENST00000422991 RNGTTO60942 597 aaKnown RBP17.04■□□□□ 0.32
COL7A1-202ENST00000422991 HEXIM1O94992 359 aaKnown RBP17.04■□□□□ 0.32
COL7A1-202ENST00000422991 IGHV4-34P06331 123 aa17.04■□□□□ 0.32
COL7A1-202ENST00000422991 PIRTP0C851 137 aa17.04■□□□□ 0.32
COL7A1-202ENST00000422991 ADCY8P40145 1251 aa17.04■□□□□ 0.32
COL7A1-202ENST00000422991 CCR5P51681 352 aa17.04■□□□□ 0.32
COL7A1-202ENST00000422991 CDK16Q00536 496 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms