RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 GDF9O60383 454 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 PMPCBO75439 489 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 ZNF189O75820 626 aaPredicted RBP15.83■□□□□ 0.12
BRAT1-202ENST00000421712 MT-CYBP00156 380 aaPredicted RBP15.83■□□□□ 0.12
BRAT1-202ENST00000421712 FGGP02679 453 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 ELFN1P0C7U0 828 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 C6P13671 934 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 NFKB1P19838 968 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 MMP12P39900 470 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 GRIA4P48058 902 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 CLDN2P57739 230 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 GNG11P61952 73 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 SNX1Q13596 522 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 ARHGEF7Q14155 803 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 FGL2Q14314 439 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 IHHQ14623 411 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 ITPRIPL1Q6GPH6 555 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 PIH1D2Q8WWB5 315 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 MAIP1Q8WWC4 291 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 ATG4AQ8WYN0 398 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 KLHDC7BQ96G42 594 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 C1QTNF2Q9BXJ5 285 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 RXFP3Q9NSD7 469 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 DNPEPQ9ULA0 475 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 ANKRD6Q9Y2G4 727 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 FRYLO94915 3013 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 PLXNA2O75051 1894 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 C10orf142B7Z368 130 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 FPGTO14772 594 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 VILLO15195 856 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 MAGEC1O60732 1142 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ALPIP09923 528 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 VIPR1P32241 457 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 CD68P34810 354 aaPredicted RBP15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ARHGAP8P85298 464 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 GRIK2Q13002 908 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 GALNT3Q14435 633 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 PRPSAP1Q14558 356 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ACOX1Q15067 660 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 KIF19Q2TAC6 998 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 UAP1L1Q3KQV9 507 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ANKRD20A2Q5SQ80 823 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ANKRD20A1Q5TYW2 823 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ANKRD20A3Q5VUR7 823 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 IL27RAQ6UWB1 636 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 LIPIQ6XZB0 460 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 DPPA4Q7L190 304 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 FAM71DQ8N9W8 422 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 MFSD2AQ8NA29 543 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 CCDC110Q8TBZ0 833 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 C1orf54Q8WWF1 131 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 SCRN2Q96FV2 425 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 PBKQ96KB5 322 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 TMEM121Q9BTD3 319 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 FRMD8P1Q9BZ68 369 aaPredicted RBP15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ZDHHC5Q9C0B5 715 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 USP29Q9HBJ7 922 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 TMEM9BQ9NQ34 198 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 FAM153AQ9UHL3 310 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ZNF148Q9UQR1 794 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 ADAMTS9Q9P2N4 1935 aa15.82■□□□□ 0.12
BRAT1-202ENST00000421712 CFAP69A5D8W1 941 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 TLR4O00206 839 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 RAD51BO15315 384 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 LIASO43766 372 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 FZD6O60353 706 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 WNT1P04628 370 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 ATP1A1P05023 1023 aaKnown RBP15.81■□□□□ 0.12
BRAT1-202ENST00000421712 HNF1BP35680 557 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 RPL26P61254 145 aaKnown RBP15.81■□□□□ 0.12
BRAT1-202ENST00000421712 CDK18Q07002 472 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 RALGDSQ12967 914 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 PTPRRQ15256 657 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 ARHGEF18Q6ZSZ5 1173 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 PTAR1Q7Z6K3 402 aaPredicted RBP15.81■□□□□ 0.12
BRAT1-202ENST00000421712 OR2I1PQ8NGU4 316 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 SLC35B2Q8TB61 432 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 ASB12Q8WXK4 309 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 LENG8Q96PV6 779 aaPredicted RBP15.81■□□□□ 0.12
BRAT1-202ENST00000421712 FCRL5Q96RD9 977 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 MLPHQ9BV36 600 aaPredicted RBP15.81■□□□□ 0.12
BRAT1-202ENST00000421712 GAREM1Q9H706 876 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 CDV3Q9UKY7 258 aaKnown RBP15.81■□□□□ 0.12
BRAT1-202ENST00000421712 RPL26L1Q9UNX3 145 aaKnown RBP15.81■□□□□ 0.12
BRAT1-202ENST00000421712 SNX11Q9Y5W9 270 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 HS3ST3A1Q9Y663 406 aa15.81■□□□□ 0.12
BRAT1-202ENST00000421712 A0A0J9YYE9 177 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 A0A1W2PR77 199 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 NPIPB15A6NHN6 443 aaPredicted RBP15.8■□□□□ 0.12
BRAT1-202ENST00000421712 C4orf47A7E2U8 309 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 ANKRD66B4E2M5 251 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 H0Y8X5 98 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 PRLP01236 227 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 TRBC1P01850 177 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 THEGLP0DJG4 465 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 ACTN2P35609 894 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 GEMP55040 296 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 WNT3AP56704 352 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 LRRC14Q15048 493 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 HLA-BQ31612 363 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms