RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 AVL9Q8NBF6 648 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 ZFP28Q8NHY6 868 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 KLHL5Q96PQ7 755 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 GGA2Q9UJY4 613 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TPP1O14773 563 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 RIPK2O43353 540 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TNFP01375 233 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 HOXB2P14652 356 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 EDNRBP24530 442 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 NME5P56597 212 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 RASIP1Q5U651 963 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CST9Q5W186 159 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 ST13P4Q8IZP2 240 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CLIP3Q96DZ5 547 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 RPL10LQ96L21 214 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 PRRG3Q9BZD7 231 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 IKZF4Q9H2S9 585 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 MINDY3Q9H8M7 445 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 HPS4Q9NQG7 708 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TDRD15B5MCY1 1934 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TMEM191CA6NGB0 347 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 SNTNA6NMZ2 147 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 SNUPNO95149 360 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CHRNA1P02708 482 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 SOX11P35716 441 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 GYS2P54840 703 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CACNG1Q06432 222 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 DAB2IPQ5VWQ8 1189 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 PHOSPHO2Q8TCD6 241 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 NSUN3Q9H649 340 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 ALG9Q9H6U8 611 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 PHTF1Q9UMS5 762 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 MSLNQ13421 630 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-206ENST00000421141 LRRC8BQ6P9F7 803 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 TXNDC11Q6PKC3 985 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 LPCAT2Q7L5N7 544 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 TAC4Q86UU9 113 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 TCAIMQ8N3R3 496 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 SPATA6Q9NWH7 488 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-206ENST00000421141 PRKAG3Q9UGI9 489 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 BUD23O43709 281 aaKnown RBP10.77□□□□□ -0.68
PTCH1-206ENST00000421141 BMPR1AP36894 532 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 GRM2Q14416 872 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 DLG2Q15700 870 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 CERS6Q6ZMG9 384 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 SIPA1Q96FS4 1042 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 IMPAD1Q9NX62 359 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 FBXL12Q9NXK8 326 aa10.77□□□□□ -0.68
PTCH1-206ENST00000421141 FAF1Q9UNN5 650 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-206ENST00000421141 RPP40O75818 363 aaKnown RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ADH1BP00325 375 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 GALTP07902 379 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ANXA6P08133 673 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 CSKP41240 450 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 PLK1P53350 603 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 RAB10P61026 200 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ACSM2AQ08AH3 577 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 BMPR2Q13873 1038 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ITPRIPL2Q3MIP1 535 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ACSM2BQ68CK6 577 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 SETD7Q8WTS6 366 aaKnown RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 APOPT1Q96IL0 206 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 TLR10Q9BXR5 811 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 THAP1Q9NVV9 213 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 FZD10Q9ULW2 581 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 RRP15Q9Y3B9 282 aaKnown RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF711Q9Y462 761 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 LRIG2O94898 1065 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 CXCR3P49682 368 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 NFYCQ13952 458 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 AP5B1Q2VPB7 878 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 SRLQ86TD4 932 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 BTN2A2Q8WVV5 523 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 METTL21AQ8WXB1 218 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 GTPBP2Q9BX10 602 aaKnown RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 CHST7Q9NS84 486 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 GMEB2Q9UKD1 530 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 MATN3O15232 486 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 GPR32O75388 356 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 GSTM1P09488 218 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 TYRP14679 529 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 LSP1P33241 339 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 GATMP50440 423 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 WDR45BQ5MNZ6 344 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 C17orf64Q86WR6 236 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 MIER2Q8N344 545 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF398Q8TD17 642 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 CYB5D2Q8WUJ1 264 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 MRPL57Q9BQC6 102 aaKnown RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 KXD1Q9BQD3 176 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 RNF39Q9H2S5 420 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 WARS2Q9UGM6 360 aaKnown RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 FER1L6Q2WGJ9 1857 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 MYADML2A6NDP7 307 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 YJEFN3A6XGL0 299 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 E7ENQ6 273 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 M0R3G1 203 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 FLOT2Q14254 428 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms