RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 SLCO1B7G3V0H7 640 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 BCAS1O75363 584 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 KRT75O95678 551 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ABCB1P08183 1280 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 MBL2P11226 248 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 UBL4AP11441 157 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ELK4P28324 431 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 SHMT2P34897 504 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CAPGP40121 348 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CASP3P42574 277 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 LEPRP48357 1165 aaKnown RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 CLK3P49761 638 aaKnown RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 CSRP3P50461 194 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 SOX10P56693 466 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 DLG2Q15700 870 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 MAPK11Q15759 364 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CYBRD1Q53TN4 286 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 PITRM1Q5JRX3 1037 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 GLRA4Q5JXX5 417 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 GRTP1Q5TC63 336 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 SEL1L3Q68CR1 1132 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 NXNQ6DKJ4 435 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 AKAP14Q86UN6 197 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 HEATR4Q86WZ0 1026 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 WDR49Q8IV35 697 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CDKL3Q8IVW4 592 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 BRSK2Q8IWQ3 736 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 SLC38A6Q8IZM9 456 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 OR2T34Q8NGX1 318 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 OR2T3Q8NH03 318 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CLEC4DQ8WXI8 215 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 PPWD1Q96BP3 646 aaKnown RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 CEP295NLQ96MC4 621 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 EMILIN2Q9BXX0 1053 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 HMG20AQ9NP66 347 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 C8orf4Q9NR00 106 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 AGPAT4Q9NRZ5 378 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CISHQ9NSE2 258 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 TBC1D14Q9P2M4 693 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CYTH4Q9UIA0 394 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ZDHHC2Q9UIJ5 367 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 MID2Q9UJV3 735 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 AP4E1Q9UPM8 1137 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CDYLQ9Y232 598 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 PCDHGA8Q9Y5G5 932 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 KPNA7A9QM74 516 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 TMEM233B4DJY2 109 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 H0Y858 1186 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 EI24O14681 340 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 APOL1O14791 398 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 SCO2O43819 266 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 TRIM13O60858 407 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 XYLBO75191 536 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 KCNK2O95069 426 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 RASAL1O95294 804 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 PIGNO95427 931 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CST3P01034 146 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 MPOP05164 745 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ICAM1P05362 532 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 SPNP16150 400 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 TFE3P19532 575 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 AXLP30530 894 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 GARSP41250 739 aaKnown RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 ACOT2P49753 483 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ZNF143P52747 638 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 PLA2G16P53816 162 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CDH6P55285 790 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 TGFB2P61812 414 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 MTMR1Q13613 665 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 PLCL1Q15111 1095 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ARSJQ5FYB0 599 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 WDR45BQ5MNZ6 344 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CCNYL2Q5T2Q4 361 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 LRRC8EQ6NSJ5 796 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 UGT3A1Q6NUS8 523 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 C8orf82Q6P1X6 216 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 PRICKLE2Q7Z3G6 844 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 AMIGO3Q86WK7 504 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CAMK1DQ8IU85 385 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 KIAA2013Q8IYS2 634 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CMTR2Q8IYT2 770 aaKnown RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 LSMEM2Q8N112 164 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 DCLK2Q8N568 766 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 SNX31Q8N9S9 440 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 C3orf58Q8NDZ4 430 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 RDH11Q8TC12 318 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ARNTL2Q8WYA1 636 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 PGLYRP2Q96PD5 576 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 C17orf80Q9BSJ5 609 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 TSEN34Q9BSV6 310 aaKnown RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 CNPY3Q9BT09 278 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 NAT9Q9BTE0 207 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 CENPOQ9BU64 300 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 EFHD1Q9BUP0 239 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ALOXE3Q9BYJ1 711 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 IL22Q9GZX6 179 aa6.13□□□□□ -1.43
CHD2-202ENST00000420239 ILKAPQ9H0C8 392 aaPredicted RBP6.13□□□□□ -1.43
CHD2-202ENST00000420239 SNX25Q9H3E2 840 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms