RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 TTC4O95801 387 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 SLC2A3P11169 496 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 MX2P20592 715 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 IVDP26440 423 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 SLC8A1P32418 973 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 SKOR1P84550 965 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 E2F1Q01094 437 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 PDK1Q15118 436 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 LLGL1Q15334 1064 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 UAP1Q16222 522 aaPredicted RBP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 TBC1D25Q3MII6 688 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 PM20D1Q6GTS8 502 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 TRNP1Q6NT89 227 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 CYP4V2Q6ZWL3 525 aaPredicted RBP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 CACTIN-AS1Q8N1I8 211 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 ZNF557Q8N988 423 aaPredicted RBP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 ATP11CQ8NB49 1132 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 ZNF248Q8NDW4 579 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 NAF1Q96HR8 494 aaKnown RBP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 SERPINB12Q96P63 405 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 PPP1R2P1Q96PQ5 205 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 RBM15Q96T37 977 aaKnown RBP eCLIP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 TMEM121Q9BTD3 319 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 CDC42EP4Q9H3Q1 356 aaKnown RBP12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 CENPHQ9H3R5 247 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 FZD10Q9ULW2 581 aa12.96□□□□□ -0.33
SDCCAG3-205ENST00000417512 TBC1D3DA0A087WVF3 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3IA0A087WXS9 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3EA0A087X179 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3KA0A087X1G2 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3FA6NER0 549 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3LB9A6J9 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 EEF2KO00418 725 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 RASGRF2O14827 1237 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 MID1O15344 667 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBL1XO60907 577 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 SIN3BO75182 1162 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CDH16O75309 829 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TCEA3O75764 348 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3HP0C7X1 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 EPHA8P29322 1005 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 L1CAMP32004 1257 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CD70P32970 193 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 LMAN1P49257 510 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CCR5P51681 352 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CDK16Q00536 496 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 RHDQ02161 417 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TRADDQ15628 312 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TRIP13Q15645 432 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CST6Q15828 149 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 DNAJC21Q5F1R6 531 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 MPP7Q5T2T1 576 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 RNASEH2BQ5TBB1 312 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3GQ6DHY5 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3CQ6IPX1 549 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 PCSK4Q6UW60 755 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 ZNF771Q7L3S4 317 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 BNIPLQ7Z465 357 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 MMAAQ8IVH4 418 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 TBC1D3Q8IZP1 549 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 OXR1Q8N573 874 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 PLD5Q8N7P1 536 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 OR14C36Q8NHC7 312 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 NDRG1Q92597 394 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 EDEM1Q92611 657 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 LRRC39Q96DD0 335 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 WBP1Q96G27 269 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 SERPINB11Q96P15 392 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CSPG4P5Q96PW8 444 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 ERVMER34-1Q9H9K5 563 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 DDIT4Q9NX09 232 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 SENP1Q9P0U3 644 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 FETUBQ9UGM5 382 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 STOML2Q9UJZ1 356 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 FZD4Q9ULV1 537 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 NFS1Q9Y697 457 aa12.95□□□□□ -0.34
SDCCAG3-205ENST00000417512 GOLGA4Q13439 2230 aaKnown RBP12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 BPTFQ12830 3046 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 A0A1W2PR77 199 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 WNT9AO14904 365 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 FGF10O15520 208 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 MAGEC1O60732 1142 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 LATS1O95835 1130 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 MT-CO3P00414 261 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 FDFT1P37268 417 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 RXRGP48443 463 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 SLC11A2P49281 568 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 UCNP55089 124 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 TMPRSS3P57727 454 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 NXPH1P58417 271 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 TPI1P60174 286 aa12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 BASP1P80723 227 aaKnown RBP12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 INSM1Q01101 510 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-205ENST00000417512 KCNC4Q03721 635 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms