RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 USP33Q8TEY7 942 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 LPGAT1Q92604 370 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 EDEM1Q92611 657 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 ZUFSPQ96AP4 578 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 SLC45A3Q96JT2 553 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 UBXN10Q96LJ8 280 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 CCT7Q99832 543 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 RHOBTB2Q9BYZ6 727 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 TRPC7Q9HCX4 862 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 ARMC1Q9NVT9 282 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 CHCHD3Q9NX63 227 aaKnown RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 CROTQ9UKG9 612 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 NEU3Q9UQ49 428 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 ARHGEF37A1IGU5 675 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 A8MT66 165 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 BBIP1A8MTZ0 92 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 HAS3O00219 553 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 SOCS2O14508 198 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 NRP2O60462 931 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 PAPSS2O95340 614 aaPredicted RBP9.84□□□□□ -0.83
CD44-206ENST00000415148 BMP2P12643 396 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 ALDH3B2P48448 385 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 ENTPD1P49961 510 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 PLOD1Q02809 727 aaPredicted RBP9.84□□□□□ -0.83
CD44-206ENST00000415148 CSHL1Q14406 222 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 SPATS1Q496A3 300 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 AGKQ53H12 422 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 BTBD8Q5XKL5 378 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 AFMIDQ63HM1 303 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 IL31Q6EBC2 164 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 ZNF470Q6ECI4 717 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 RWDD4Q6NW29 188 aaKnown RBP9.84□□□□□ -0.83
CD44-206ENST00000415148 ELMSAN1Q6PJG2 1045 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 CUZD1Q86UP6 607 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 PACRGLQ8N7B6 248 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 ANKFN1Q8N957 763 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 GOLM1Q8NBJ4 401 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 OR9I1Q8NGQ6 314 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 HM13Q8TCT9 377 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 FATE1Q969F0 183 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 L3HYPDHQ96EM0 354 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 LRCH3Q96II8 777 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 ASB2Q96Q27 587 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 FSD1LQ9BXM9 530 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 TRPV6Q9H1D0 765 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 NOL11Q9H8H0 719 aaKnown RBP9.84□□□□□ -0.83
CD44-206ENST00000415148 DUS2Q9NX74 493 aaKnown RBP9.84□□□□□ -0.83
CD44-206ENST00000415148 MTF2Q9Y483 593 aaPredicted RBP9.84□□□□□ -0.83
CD44-206ENST00000415148 TRAF6Q9Y4K3 522 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 CEP350Q5VT06 3117 aa9.84□□□□□ -0.83
CD44-206ENST00000415148 H3BNH8 94 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 BOLA2-SMG1P6H3BVE0 249 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 DYNC1LI2O43237 492 aaPredicted RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 TIPRLO75663 272 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 KCNA5P22460 613 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 RPL9P32969 192 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 GJA5P36382 358 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 ETFBP38117 255 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 DCTN2Q13561 401 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 LPIN1Q14693 890 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 LDLRAD1Q5T700 205 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 MANEALQ5VSG8 457 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 TWF2Q6IBS0 349 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 PPP4R4Q6NUP7 873 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 ARHGAP36Q6ZRI8 547 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 LARP4Q71RC2 724 aaKnown RBP eCLIP9.83□□□□□ -0.84
CD44-206ENST00000415148 ERI1Q8IV48 349 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 HERC6Q8IVU3 1022 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 TRIML2Q8N7C3 387 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 KLHL23Q8NBE8 558 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 PCYOX1LQ8NBM8 494 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 DQX1Q8TE96 717 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 DIS3LQ8TF46 1054 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 MRGPRX2Q96LB1 330 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 HOPXQ9BPY8 73 aaPredicted RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 TMEM79Q9BSE2 394 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 SLC39A8Q9C0K1 460 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 SPON1Q9HCB6 807 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 CHST12Q9NRB3 414 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 PNPLA3Q9NST1 481 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 TMEM30AQ9NV96 361 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 TUBA8Q9NY65 449 aaPredicted RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 SLC2A6Q9UGQ3 507 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 RSL24D1Q9UHA3 163 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 MYRFQ9Y2G1 1151 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 SNX13Q9Y5W8 968 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 PDHXO00330 501 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 TNPO2O14787 897 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 MRASO14807 208 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 AURKAO14965 403 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 SRP72O76094 671 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 THP07101 528 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 PSEN2P49810 448 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 C1QTNF8P60827 252 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 NRG1Q02297 640 aaPredicted RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 C6orf10Q5SRN2 563 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 PRMT9Q6P2P2 845 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 FAM171BQ6P995 826 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 LPCAT2Q7L5N7 544 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 GPR142Q7Z601 462 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms