RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZDHHC18Q9NUE0 388 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 SPTLC3Q9NUV7 552 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 FBXO28Q9NVF7 368 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 TBC1D13Q9NVG8 400 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 PCDHB10Q9UN67 800 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 FADS3Q9Y5Q0 445 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 SNX13Q9Y5W8 968 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 NISCHQ9Y2I1 1504 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 SALL3Q9BXA9 1300 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 NPC1L1Q9UHC9 1359 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 FAM237AA0A1B0GTK4 181 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SYCE3A1L190 88 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ANKRD34BA5PLL1 514 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ARGFXA6NJG6 315 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CBX4O00257 560 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 BTN3A1O00481 513 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CYR61O00622 381 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SOCS6O14544 535 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 GPR171O14626 319 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 FPGTO14772 594 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 XPO1O14980 1071 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 KCNN4O15554 427 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MED7O43513 233 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 STX10O60499 249 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PPP6R2O75170 966 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RPP40O75818 363 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CIB2O75838 187 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 DNAJB5O75953 348 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PTBP3O95758 552 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 LGI1O95970 557 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PDGFBP01127 241 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 KRT7P08729 469 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CCDC192P0DO97 292 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 UMPSP11172 480 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PABPC1P11940 636 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ATF2P15336 505 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 POLR2CP19387 275 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SLC9A1P19634 815 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 IGFBP6P24592 240 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ADRA1DP25100 572 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ABCD3P28288 659 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 HLA-FP30511 346 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 HNRNPH1P31943 449 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 BMPR1AP36894 532 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SLC9A3P48764 834 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ACADVLP49748 655 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CLCN5P51795 746 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CLCNKBP51801 687 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SLC7A2P52569 658 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 NAGLUP54802 743 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MTTPP55157 894 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 NCKAP1LP55160 1127 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CDH6P55285 790 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 STX17P56962 302 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 HERVK_113P62684 666 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PPP2R2AP63151 447 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 LACTBP83111 547 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CDK18Q07002 472 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 TNFAIP1Q13829 316 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 TBCEQ15813 527 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 FAM83EQ2M2I3 478 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SMTNL2Q2TAL5 461 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 DNAL1Q4LDG9 190 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF628Q5EBL2 1059 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 NHSL2Q5HYW2 709 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PRAMEF14Q5SWL7 426 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PLEKHS1Q5SXH7 462 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 THEMIS2Q5TEJ8 643 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ANKRD20A3Q5VUR7 823 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RRAGBQ5VZM2 374 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 FAM109BQ6ICB4 259 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 KIAA1841Q6NSI8 718 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CYP20A1Q6UW02 462 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SUSD1Q6UWL2 747 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 LAYNQ6UX15 382 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 DPP8Q6V1X1 898 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 NSMFQ6X4W1 530 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RBM43Q6ZSC3 357 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MSANTD1Q6ZTZ1 278 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SLC24A5Q71RS6 500 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RRAGAQ7L523 313 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 EFL1Q7Z2Z2 1120 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 HEATR3Q7Z4Q2 680 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CPLX4Q7Z7G2 160 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PHLDB2Q86SQ0 1253 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 LDHDQ86WU2 507 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MAP7D3Q8IWC1 876 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MB21D2Q8IYB1 491 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ARHGAP18Q8N392 663 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SFRP1Q8N474 314 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ARFGAP1Q8N6T3 406 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 POMGNT2Q8NAT1 580 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 POGLUT1Q8NBL1 392 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 C11orf65Q8NCR3 313 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 BHLHE23Q8NDY6 225 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 NSUN7Q8NE18 718 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 OR7G1Q8NGA0 311 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ANGPTL6Q8NI99 470 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms