RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CRNNQ9UBG3 495 aaPredicted RBP5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 FBLN5Q9UBX5 448 aa5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 HSPB7Q9UBY9 170 aa5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 DNAI1Q9UI46 699 aa5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 TRMT6Q9UJA5 497 aaKnown RBP5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 DNPEPQ9ULA0 475 aa5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 STK38LQ9Y2H1 464 aa5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 R3HDM2Q9Y2K5 976 aaKnown RBP5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 PCDHB7Q9Y5E2 793 aa5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 DDX49Q9Y6V7 483 aaKnown RBP5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 BCORL1Q5H9F3 1711 aa5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 ZNF644Q9H582 1327 aaPredicted RBP5.93□□□□□ -1.46
CBX1P3-201ENST00000413296 MADDQ8WXG6 1647 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SERTM2A0A1B0GWG4 89 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 FAM230AA0A1W2PPH8 454 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 A0A1W2PRG0 241 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 PMS2P1A4D2B8 440 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 TRIM49BA6NDI0 452 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ARHGAP42A6NI28 874 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 LRRC53A6NM62 1247 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 TMCO5BA8MYB1 307 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 M0QYT0 321 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SNAP23O00161 211 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 PLK4O00444 970 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 DYNC1LI2O43237 492 aaPredicted RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 DEAF1O75398 565 aaPredicted RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CIB2O75838 187 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CELF2O95319 508 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 TRUB2O95900 331 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 GASTP01350 101 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 LIPFP07098 398 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SRPRAP08240 638 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 VIMP08670 466 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 RALAP11233 206 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 PCNAP12004 261 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ELNP15502 786 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 VCLP18206 1134 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CYP2A7P20853 494 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 RPL10P27635 214 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 MAP4P27816 1152 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 THBS4P35443 961 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 HNF1BP35680 557 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ARHGAP25P42331 645 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 NR2C2P49116 596 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 NAGLUP54802 743 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 UCP2P55851 309 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CORO7P57737 925 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ANTXR2P58335 489 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 RUNX2Q13950 521 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 WDR43Q15061 677 aaKnown RBP eCLIP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 UGP2Q16851 508 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 MGAT5BQ3V5L5 792 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 TAF1BQ53T94 588 aaPredicted RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ZNF789Q5FWF6 425 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ZNF667Q5HYK9 610 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 OGFOD3Q6PK18 319 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 TSSK4Q6SA08 328 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CES3Q6UWW8 571 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 GSTA5Q7RTV2 222 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CENPVQ7Z7K6 275 aaPredicted RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ZNF410Q86VK4 478 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 NUDT13Q86X67 352 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ZNF573Q86YE8 665 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 TIGD4Q8IY51 512 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ABRAQ8N0Z2 381 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 GUF1Q8N442 669 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SIRT6Q8N6T7 355 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 UXS1Q8NBZ7 420 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 MBD3L2Q8NHZ7 208 aaPredicted RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CNOT9Q92600 299 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SYN2Q92777 582 aaPredicted RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 INPP5DQ92835 1189 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 GTF3C6Q969F1 213 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 MIB2Q96AX9 1013 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 PHF21BQ96EK2 531 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 C14orf79Q96F83 325 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ELMOD3Q96FG2 381 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ZFP42Q96MM3 310 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 NAP1L3Q99457 506 aaPredicted RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 DPYSL5Q9BPU6 564 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 INPP5KQ9BT40 448 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 DUSP23Q9BVJ7 150 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 BTBD2Q9BX70 525 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 GPR61Q9BZJ8 451 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 NACA2Q9H009 215 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SIK2Q9H0K1 926 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 P2RY12Q9H244 342 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SEMA6CQ9H3T2 930 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 PLK3Q9H4B4 646 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 ECT2Q9H8V3 914 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 CARS2Q9HA77 564 aaKnown RBP5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 THAP1Q9NVV9 213 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 MOCS1Q9NZB8 636 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 SPG21Q9NZD8 308 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 LMCD1Q9NZU5 365 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 DLGAP2Q9P1A6 1054 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 PEMTQ9UBM1 199 aa5.92□□□□□ -1.46
CBX1P3-201ENST00000413296 VPS51Q9UID3 782 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms