RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PDGFDQ9GZP0 370 aaPredicted RBP17.71■□□□□ 0.43
SDCBP-202ENST00000413219 GSTO2Q9H4Y5 243 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 WDCPQ9H6R7 721 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 ZNF236Q9UL36 1845 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 NCAM1P13591 858 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 IMPDH1P20839 514 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 AKAP5P24588 427 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 FASP25445 335 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 DCKP27707 260 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 CD97P48960 835 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 LILRA4P59901 499 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 NEPROQ6NW34 567 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 LYSMD3Q7Z3D4 306 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 SPRED1Q7Z699 444 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 ZNF354CQ86Y25 554 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 EPHX4Q8IUS5 362 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 MINDY1Q8N5J2 469 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 CALML6Q8TD86 181 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 SEPT8Q92599 483 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 BORCS5Q969J3 196 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 L3HYPDHQ96EM0 354 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 CENPNQ96H22 339 aaPredicted RBP17.71■□□□□ 0.43
SDCBP-202ENST00000413219 YTHDF1Q9BYJ9 559 aaKnown RBP17.71■□□□□ 0.43
SDCBP-202ENST00000413219 TBC1D23Q9NUY8 699 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 SLC2A6Q9UGQ3 507 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 TRIM64BA6NI03 449 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 NME4O00746 187 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 FCGR1AP12314 374 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 ARSAP15289 507 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 PSMA4P25789 261 aaKnown RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 AXLP30530 894 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 CTBSQ01459 385 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 RAB41Q5JT25 222 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 CYHR1Q6ZMK1 362 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 OR9I1Q8NGQ6 314 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 USP33Q8TEY7 942 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 SNRNP27Q8WVK2 155 aaKnown RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 CELF6Q96J87 481 aaKnown RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 UBXN10Q96LJ8 280 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 CXorf21Q9HAI6 301 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 VTA1Q9NP79 307 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 RNF19AQ9NV58 838 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 ACTR3BQ9P1U1 418 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 RBM47A0AV96 593 aaKnown RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 GABRDO14764 452 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 MT-CYBP00156 380 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 GNAO1P09471 354 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 YWHAQP27348 245 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 TPP2P29144 1249 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 SLC26A3P40879 764 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 SOX4Q06945 474 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 ZNF829Q3KNS6 432 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 RBM20Q5T481 1227 aaKnown RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 TMTC4Q5T4D3 741 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 GALNT7Q86SF2 657 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 RETREG3Q86VR2 466 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 C19orf60Q96EN9 201 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 CNDP2Q96KP4 475 aaKnown RBP17.7■□□□□ 0.42
SDCBP-202ENST00000413219 CAMKK2Q96RR4 588 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 OLFM1Q99784 485 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 TKTL2Q9H0I9 626 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 MUC13Q9H3R2 512 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 SNX10Q9Y5X0 201 aa17.7■□□□□ 0.42
SDCBP-202ENST00000413219 GOLGB1Q14789 3259 aaKnown RBP17.69■□□□□ 0.42
SDCBP-202ENST00000413219 LTBP3Q9NS15 1303 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 GPR32O75388 356 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 RASAL1O95294 804 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 GPIP06744 558 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 CYP2C18P33260 490 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 LEPRP48357 1165 aaKnown RBP17.69■□□□□ 0.42
SDCBP-202ENST00000413219 CCT8P50990 548 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 FOXM1Q08050 763 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 SPIDRQ14159 915 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 ANKRD13AQ8IZ07 590 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 ATPAF2Q8N5M1 289 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 MYRFLQ96LU7 910 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 SLC39A3Q9BRY0 314 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 RPF2Q9H7B2 306 aaKnown RBP17.69■□□□□ 0.42
SDCBP-202ENST00000413219 TMEM9Q9P0T7 183 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 MAP10Q9P2G4 905 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 CDC14AQ9UNH5 594 aa17.69■□□□□ 0.42
SDCBP-202ENST00000413219 ALDOCP09972 364 aaKnown RBP17.68■□□□□ 0.42
SDCBP-202ENST00000413219 NFKB2Q00653 900 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 COQ5Q5HYK3 327 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 ZNF280DQ6N043 979 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 ABRAXAS1Q6UWZ7 409 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 ZBTB8BQ8NAP8 495 aaPredicted RBP17.68■□□□□ 0.42
SDCBP-202ENST00000413219 RSPH1Q8WYR4 309 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 THAP11Q96EK4 314 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 ASB2Q96Q27 587 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 CYP2S1Q96SQ9 504 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 GOLGA2P5Q9HBQ8 144 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 TBC1D13Q9NVG8 400 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 GID8Q9NWU2 228 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 AURKCQ9UQB9 309 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 TLL2Q9Y6L7 1015 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 SHROOM3Q8TF72 1996 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 A0A0J9YYE9 177 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 KANSL1LA0AUZ9 987 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 TTC24A2A3L6 582 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms