RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 AGAP3Q96P47 875 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 OLFM3Q96PB7 478 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 LENG8Q96PV6 779 aaPredicted RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 C10orf88Q9H8K7 445 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 UCKL1Q9NWZ5 548 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 CHKBQ9Y259 395 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSB-203ENST00000413002 PCDHGB2Q9Y5G2 931 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 TRPM6Q9BX84 2022 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 SHROOM3Q8TF72 1996 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 CABIN1Q9Y6J0 2220 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 F5H423 210 aaPredicted RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 SCAMP1O15126 338 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 FLRT2O43155 660 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 DFNA5O60443 496 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 MAGEC1O60732 1142 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 SOCS5O75159 536 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 RECQL5O94762 991 aaPredicted RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 PGLSO95336 258 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 PCCBP05166 539 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ATXN1LP0C7T5 689 aaKnown RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 ELFN1P0C7U0 828 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ZFXP17010 805 aaPredicted RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 GM2AP17900 193 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 CTNNA1P35221 906 aaKnown RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 CD86P42081 329 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 SUOXP51687 545 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 PFN3P60673 137 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 TFDP2Q14188 446 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 LRRC14Q15048 493 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ACOX1Q15067 660 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 KYAT3Q6YP21 454 aaKnown RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 DPPA4Q7L190 304 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 KDELC2Q7Z4H8 507 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 TSPAN33Q86UF1 283 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ZC3H18Q86VM9 953 aaKnown RBP13.2□□□□□ -0.3
SSB-203ENST00000413002 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 EXD1Q8NHP7 514 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ASB12Q8WXK4 309 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ALG3Q92685 438 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 IL12RB2Q99665 862 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 FAM118BQ9BPY3 351 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ERVMER34-1Q9H9K5 563 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 DNAJC28Q9NX36 388 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 OR1A2Q9Y585 309 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
SSB-203ENST00000413002 SPTY2D1-AS1A0A0U1RR47 76 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
SSB-203ENST00000413002 FFAR2O15552 330 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 MMP2P08253 660 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 LHCGRP22888 699 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 GRK6P43250 576 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 RABIFP47224 123 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 RXRGP48443 463 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 PEX5P50542 639 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 GSDMDP57764 484 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 IFI35P80217 286 aaPredicted RBP13.19□□□□□ -0.3
SSB-203ENST00000413002 FOXK2Q01167 660 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 ZNF211Q13398 564 aaPredicted RBP13.19□□□□□ -0.3
SSB-203ENST00000413002 INPP5AQ14642 412 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 TCEA2Q15560 299 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 CNGA3Q16281 694 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 RFLNAQ6ZTI6 216 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 HSD11B1LQ7Z5J1 315 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 SLCO6A1Q86UG4 719 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 NT5DC3Q86UY8 548 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 PELI3Q8N2H9 469 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 SLC25A45Q8N413 288 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 DENND6BQ8NEG7 585 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 BAHD1Q8TBE0 780 aaPredicted RBP13.19□□□□□ -0.3
SSB-203ENST00000413002 P3H4Q92791 437 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 FATE1Q969F0 183 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
SSB-203ENST00000413002 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.3
SSB-203ENST00000413002 TCEAL2Q9H3H9 227 aaPredicted RBP13.19□□□□□ -0.3
SSB-203ENST00000413002 PNMA8BQ9ULN7 279 aaPredicted RBP13.19□□□□□ -0.3
SSB-203ENST00000413002 PHTF1Q9UMS5 762 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 CAPN6Q9Y6Q1 641 aa13.19□□□□□ -0.3
SSB-203ENST00000413002 K7ESM1 405 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 FZD6O60353 706 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 HEXIM1O94992 359 aaKnown RBP13.18□□□□□ -0.3
SSB-203ENST00000413002 PRLP01236 227 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 FTH1P19P0C7X4 201 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 PYGMP11217 842 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 MYF5P13349 255 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 TGM2P21980 687 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 DGKAP23743 735 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 PTPN3P26045 913 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 CTNNA2P26232 953 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 VIPR1P32241 457 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 HNF1BP35680 557 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 THOP1P52888 689 aa13.18□□□□□ -0.3
SSB-203ENST00000413002 EPHB1P54762 984 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms