RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TBC1D3EA0A087X179 549 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TBC1D3KA0A087X1G2 549 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TBC1D3FA6NER0 549 aaPredicted RBP20.71■□□□□ 0.91
C4orf48-202ENST00000409860 FAM47DPA6NHR8 397 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TBC1D3LB9A6J9 549 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 DNALI1O14645 258 aaPredicted RBP20.71■□□□□ 0.91
C4orf48-202ENST00000409860 NDC80O14777 642 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 MAP3K13O43283 966 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 USP12O75317 370 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 PCDH8O95206 1070 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 ALPIP09923 528 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TBC1D3HP0C7X1 549 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 VIPR1P32241 457 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 MMP12P39900 470 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 CHRNA4P43681 627 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 SARNPP82979 210 aaKnown RBP20.71■□□□□ 0.91
C4orf48-202ENST00000409860 OLIG2Q13516 323 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 KCNJ11Q14654 390 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TBC1D3GQ6DHY5 549 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TBC1D3CQ6IPX1 549 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 PPIL6Q8IXY8 311 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TBC1D3Q8IZP1 549 aaPredicted RBP20.71■□□□□ 0.91
C4orf48-202ENST00000409860 NOA1Q8NC60 698 aaKnown RBP20.71■□□□□ 0.91
C4orf48-202ENST00000409860 CXorf40AQ8TE69 158 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 CPT1BQ92523 772 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 ERP44Q9BS26 406 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 TRIM31Q9BZY9 425 aa20.71■□□□□ 0.91
C4orf48-202ENST00000409860 PRR23AA6NEV1 266 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 SPINT1O43278 529 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 ITIH2P19823 946 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 HNF1BP35680 557 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 RPL6Q02878 288 aaKnown RBP20.7■□□□□ 0.9
C4orf48-202ENST00000409860 ARHGEF7Q14155 803 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 TMEM52BQ4KMG9 183 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 GLE1Q53GS7 698 aaKnown RBP20.7■□□□□ 0.9
C4orf48-202ENST00000409860 IZUMO3Q5VZ72 239 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 KIAA1161Q6NSJ0 714 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 NEK5Q6P3R8 708 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 FRMD1Q8N878 549 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 DNAAF3Q8N9W5 541 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 ZBTB44Q8NCP5 570 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 BBOF1Q8ND07 529 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 SNF8Q96H20 258 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 LYSMD1Q96S90 227 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 LRRC1Q9BTT6 524 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 GPR174Q9BXC1 333 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 PCED1AQ9H1Q7 454 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 ARNT2Q9HBZ2 717 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 MBD1Q9UIS9 605 aaPredicted RBP20.7■□□□□ 0.9
C4orf48-202ENST00000409860 GGT7Q9UJ14 662 aa20.7■□□□□ 0.9
C4orf48-202ENST00000409860 NPIPB15A6NHN6 443 aaPredicted RBP20.69■□□□□ 0.9
C4orf48-202ENST00000409860 AP3B1O00203 1094 aa20.69■□□□□ 0.9
C4orf48-202ENST00000409860 SEMG2Q02383 582 aa20.69■□□□□ 0.9
C4orf48-202ENST00000409860 CDH17Q12864 832 aa20.69■□□□□ 0.9
C4orf48-202ENST00000409860 RNASEH2BQ5TBB1 312 aaKnown RBP20.69■□□□□ 0.9
C4orf48-202ENST00000409860 WRAP53Q9BUR4 548 aaKnown RBP20.69■□□□□ 0.9
C4orf48-202ENST00000409860 MAGEE1Q9HCI5 957 aa20.69■□□□□ 0.9
C4orf48-202ENST00000409860 HACD3Q9P035 362 aa20.69■□□□□ 0.9
C4orf48-202ENST00000409860 ZNF318Q5VUA4 2279 aa20.69■□□□□ 0.9
C4orf48-202ENST00000409860 A8MX80 341 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 H0Y858 1186 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 SMAPO00193 183 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 RNGTTO60942 597 aaKnown RBP20.68■□□□□ 0.9
C4orf48-202ENST00000409860 ELFN1P0C7U0 828 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 ZNF30P17039 623 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 BCKDHBP21953 392 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 IVDP26440 423 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 RPS21P63220 83 aaKnown RBP20.68■□□□□ 0.9
C4orf48-202ENST00000409860 RALGDSQ12967 914 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 ANKRD22Q5VYY1 191 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 KIAA0895LQ68EN5 471 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 DENND5AQ6IQ26 1287 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 ZC3H14Q6PJT7 736 aaKnown RBP20.68■□□□□ 0.9
C4orf48-202ENST00000409860 CEP68Q76N32 757 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 HOOK3Q86VS8 718 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 TRIM69Q86WT6 500 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 HORMAD1Q86X24 394 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 NAT8LQ8N9F0 302 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 MCUQ8NE86 351 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 CADM4Q8NFZ8 388 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 OR52K1Q8NGK4 314 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 BLOC1S5Q8TDH9 187 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 SMIM14Q96QK8 99 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 DPH5Q9H2P9 285 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 TRABDQ9H4I3 376 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 C6orf106Q9H6K1 298 aaPredicted RBP20.68■□□□□ 0.9
C4orf48-202ENST00000409860 CASS4Q9NQ75 786 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 SNX24Q9Y343 169 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 ZNF711Q9Y462 761 aa20.68■□□□□ 0.9
C4orf48-202ENST00000409860 ANKRD36A6QL64 1941 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 C1orf232A0A0U1RR37 186 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 A0A1W2PQU0 124 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 TCRBV7S3A2A0A539 114 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 HRO43593 1189 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 TMEM63AO94886 807 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 SEC31AO94979 1220 aaKnown RBP20.67■□□□□ 0.9
C4orf48-202ENST00000409860 HEXIM1O94992 359 aaKnown RBP20.67■□□□□ 0.9
C4orf48-202ENST00000409860 PIRTP0C851 137 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 LHCGRP22888 699 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 RPL21P46778 160 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms