RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NAB1Q13506 487 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PYDC2Q56P42 97 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 STXBP5Q5T5C0 1151 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 C1orf94Q6P1W5 598 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 RBM43Q6ZSC3 357 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ATCAYQ86WG3 371 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ARL14EPQ8N8R7 260 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 DCBLD1Q8N8Z6 715 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 GMCL1P1Q8NEA9 526 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TSEN15Q8WW01 171 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 BRD7Q9NPI1 651 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PHF11Q9UIL8 331 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ATP6AP2A0A1C7CYW4 349 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 EML1O00423 815 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PLOD3O60568 738 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ATP6AP2O75787 350 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CHRNGP07510 517 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 MAD2L1Q13257 205 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 RIPOR3Q96MK2 946 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CYP3A43Q9HB55 503 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 C1orf167Q5SNV9 1468 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PREX2Q70Z35 1606 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CNTNAP1P78357 1384 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 MLLT3P42568 568 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF433Q8N7K0 673 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ATAD1Q8NBU5 361 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 DNAAF1Q8NEP3 725 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 OR10Q1Q8NGQ4 319 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CLEC4MQ9H2X3 399 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 EPB41L1Q9H4G0 881 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CMTM6Q9NX76 183 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 POU2F3Q9UKI9 436 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 COLEC10Q9Y6Z7 277 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TM9SF1O15321 606 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 OR1F1O43749 312 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CDC40O60508 579 aaKnown RBP eCLIP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 WARSP23381 471 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 FASP25445 335 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 POU5F1Q01860 360 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PPIGQ13427 754 aaKnown RBP eCLIP8.44□□□□□ -1.061e-6■■□□□ 11.6
SCN9A-203ENST00000409672 SMARCD3Q6STE5 483 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PAGE2Q7Z2X7 111 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 GALNT5Q7Z7M9 940 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 FNDC11Q9BVV2 318 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ADCY10Q96PN6 1610 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 A0A1B0GTH6 734 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 AXLP30530 894 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 SHMT1P34896 483 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 MGAT5Q09328 741 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TAF10Q12962 218 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 MYBPC2Q14324 1141 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PTPRNQ16849 979 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CRY2Q49AN0 593 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 Q4G0T1 1027 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 FBXO42Q6P3S6 717 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 C4orf19Q8IY42 314 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TCF7L2Q9NQB0 619 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TMA7Q9Y2S6 64 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ARHGEF33A8MVX0 844 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 C9IYK1 514 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 RARRES1P49788 294 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 GJA9P57773 515 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 HECTD2Q5U5R9 776 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 RHBDF2Q6PJF5 856 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF571Q7Z3V5 609 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PEX5LQ8IYB4 626 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 RASGEF1AQ8N9B8 481 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PLEKHA1Q9HB21 404 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 AGO1Q9UL18 857 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 VPS4AQ9UN37 437 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 UNC13BO14795 1591 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MYH6P13533 1939 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 PAPSS1O43252 624 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MFN2O95140 757 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CBX5P45973 191 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MAPK7Q13164 816 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MSANTD2Q6P1R3 559 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 NAPRTQ6XQN6 538 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 ZSCAN1Q8NBB4 408 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 TSTD1Q8NFU3 115 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 PHF10Q8WUB8 498 aaKnown RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 JPH3Q8WXH2 748 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 FAM84AQ96KN4 292 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 KIAA1522Q9P206 1035 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 SSNA1O43805 119 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MTRF1O75570 445 aaKnown RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 SLITRK3O94933 977 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MT-CYBP00156 380 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 NCK1P16333 377 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CRABP2P29373 138 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CYP2C18P33260 490 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 TMEM164Q5U3C3 297 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 OTOP1Q7RTM1 612 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 SLC22A15Q8IZD6 547 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 PAIP1Q9H074 479 aaKnown RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 POLMQ9NP87 494 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 PCDHGA6Q9Y5G7 932 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 GRM6O15303 877 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms