RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 DDX4Q9NQI0 724 aaKnown RBP4.18□□□□□ -1.74
PMS1-203ENST00000409593 SLC25A10Q9UBX3 287 aaPredicted RBP4.18□□□□□ -1.74
PMS1-203ENST00000409593 LRRFIP2Q9Y608 721 aaKnown RBP4.18□□□□□ -1.74
PMS1-203ENST00000409593 WNT9BO14905 357 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 LDB3O75112 727 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 KDM4BO94953 1096 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 MT-CYBP00156 380 aaPredicted RBP4.17□□□□□ -1.74
PMS1-203ENST00000409593 SNRNP70P08621 437 aaKnown RBP4.17□□□□□ -1.74
PMS1-203ENST00000409593 COX7A2P14406 83 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 HNRNPH1P31943 449 aaKnown RBP4.17□□□□□ -1.74
PMS1-203ENST00000409593 EFNB3Q15768 340 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 SETMARQ53H47 684 aaPredicted RBP4.17□□□□□ -1.74
PMS1-203ENST00000409593 PAPPA-AS1Q5QFB9 102 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 SLC35F3Q8IY50 421 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 DSELQ8IZU8 1212 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 KLHL29Q96CT2 875 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 C3orf30Q96M34 536 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 KXD1Q9BQD3 176 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 ZNF556Q9HAH1 456 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 RCOR1Q9UKL0 485 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 ARHGAP26Q9UNA1 814 aa4.17□□□□□ -1.74
PMS1-203ENST00000409593 CCDC196A0A1B0GTZ2 297 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 CPED1A4D0V7 1026 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 NPIPB11E5RHQ5 1161 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 IFNL4K9M1U5 179 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 SOCS6O14544 535 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 BUB3O43684 328 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 NDUFS7O75251 213 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 GAGE7O76087 117 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 ZNF432O94892 652 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 MMP2P08253 660 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 GAGE12FP0CL80 117 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 GAGE12GP0CL81 117 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 GAGE12IP0CL82 117 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 IRF1P10914 325 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 STX2P32856 288 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 EIF2S3P41091 472 aaKnown RBP4.16□□□□□ -1.74
PMS1-203ENST00000409593 GAGE1Q13065 139 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 GAGE4Q13068 117 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 RNPS1Q15287 305 aaKnown RBP4.16□□□□□ -1.74
PMS1-203ENST00000409593 AMZ1Q400G9 498 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 ATP13A5Q4VNC0 1218 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 SLC9B1Q4ZJI4 515 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 FAM76BQ5HYJ3 339 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 FAM69AQ5T7M9 428 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 FBXO46Q6PJ61 603 aaPredicted RBP4.16□□□□□ -1.74
PMS1-203ENST00000409593 HEATR4Q86WZ0 1026 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 AGBL3Q8NEM8 1001 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 SPATA20Q8TB22 786 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 RNF125Q96EQ8 232 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 BICD1Q96G01 975 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 IL17FQ96PD4 163 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 SLC25A18Q9H1K4 315 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 PPP1R14DQ9NXH3 145 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 LSM4Q9Y4Z0 139 aaKnown RBP4.16□□□□□ -1.74
PMS1-203ENST00000409593 SNAP23O00161 211 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 CLDN14O95500 239 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 PMS2P2O95744 297 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 TFP02787 698 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 G6PDP11413 515 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 TMEM95Q3KNT9 176 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 ZNF718Q3SXZ3 478 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 PPP6R3Q5H9R7 873 aaPredicted RBP4.16□□□□□ -1.74
PMS1-203ENST00000409593 TXNDC8Q6A555 127 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 WDR73Q6P4I2 378 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 DLK2Q6UY11 383 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 ZBTB2Q8N680 514 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 ESX1Q8N693 406 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 BEST2Q8NFU1 509 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 NEK9Q8TD19 979 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 SECTM1Q8WVN6 248 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 ST8SIA4Q92187 359 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 H2AFJQ9BTM1 129 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 CNGB3Q9NQW8 809 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 KCND2Q9NZV8 630 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 MPP6Q9NZW5 540 aa4.16□□□□□ -1.74
PMS1-203ENST00000409593 ATXN2Q99700 1313 aaKnown RBP4.15□□□□□ -1.74
PMS1-203ENST00000409593 LDLRAD4O15165 306 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 CAMTA2O94983 1202 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 AGAP20933 346 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 NLRP5P59047 1200 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 NEXNQ0ZGT2 675 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 FOXD4Q12950 439 aaPredicted RBP4.15□□□□□ -1.75
PMS1-203ENST00000409593 TNFAIP1Q13829 316 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 ZNF672Q499Z4 452 aaPredicted RBP4.15□□□□□ -1.75
PMS1-203ENST00000409593 SLC9C2Q5TAH2 1124 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 SMC5Q8IY18 1101 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 RND1Q92730 232 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 ZNF385AQ96PM9 386 aaKnown RBP4.15□□□□□ -1.75
PMS1-203ENST00000409593 SLITRK1Q96PX8 696 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 HAUS8Q9BT25 410 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 C17orf75Q9HAS0 396 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 SMARCAL1Q9NZC9 954 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 ZNF224Q9NZL3 707 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 SIX4Q9UIU6 781 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 SARDHQ9UL12 918 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 A4GNTQ9UNA3 340 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 PCDHAC2Q9Y5I4 1007 aa4.15□□□□□ -1.75
PMS1-203ENST00000409593 TCF20Q9UGU0 1960 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms