RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CD68P34810 354 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 LIG3P49916 1009 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 SEMG2Q02383 582 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 RALGDSQ12967 914 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 DARS2Q6PI48 645 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 USP45Q70EL2 814 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 SLC13A5Q86YT5 568 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 NDUFAF2Q8N183 169 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 ZNF567Q8N184 647 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 TADA1Q96BN2 335 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 RBM15Q96T37 977 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 KLF6Q99612 283 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 C1QTNF7Q9BXJ2 289 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 C10orf88Q9H8K7 445 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 PCDH9Q9HC56 1237 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 FZD3Q9NPG1 666 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 TRMT1Q9NXH9 659 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 KLHL8Q9P2G9 620 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 B4GALT6Q9UBX8 382 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 CHKBQ9Y259 395 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 CA5BQ9Y2D0 317 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 JRKLQ9Y4A0 524 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 HS3ST3A1Q9Y663 406 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 C4orf47A7E2U8 309 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 TLR4O00206 839 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 RAD51BO15315 384 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 C6P13671 934 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 SDHBP21912 280 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 HLA-BQ31612 363 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 PID1Q7Z2X4 250 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 MINDY1Q8N5J2 469 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 DENND6BQ8NEG7 585 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 FAM174AQ8TBP5 190 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 CENPTQ96BT3 561 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 MYOCQ99972 504 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 CDV3Q9UKY7 258 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 R3HDM2Q9Y2K5 976 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 SNX11Q9Y5W9 270 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 CABIN1Q9Y6J0 2220 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 PLXNA2O75051 1894 aa19.93■□□□□ 0.78
PDLIM2-207ENST00000409417 MAGEC1O60732 1142 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 STK10O94804 968 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 ELFN1P0C7U0 828 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 CYP2A6P11509 494 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 CTSKP43235 329 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 EPHB1P54762 984 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 AGERQ15109 404 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 RSPO4Q2I0M5 234 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 LIPIQ6XZB0 460 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 ABI3BPQ7Z7G0 1075 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 SLC35B2Q8TB61 432 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 ADGRE3Q9BY15 652 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 USP29Q9HBJ7 922 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 A0A0J9YYE9 177 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 A8MX80 341 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 H0Y8X5 98 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 SLC30A4O14863 429 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 KCNN4O15554 427 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 KIF5CO60282 957 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 CER1O95813 267 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 TRBC1P01850 177 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 NFKB1P19838 968 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 VIPR1P32241 457 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 CLDN2P57739 230 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 NXPH1P58417 271 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 ZNF569Q5MCW4 686 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 GCNT7Q6ZNI0 430 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 OR2I1PQ8NGU4 316 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 SPATA22Q8NHS9 363 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 KLHDC7BQ96G42 594 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 FCRL5Q96RD9 977 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 TRIB3Q96RU7 358 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 FRMD8P1Q9BZ68 369 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 GAREM1Q9H706 876 aa19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 DNAAF2Q9NVR5 837 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-207ENST00000409417 CNOT1A5YKK6 2376 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 NPIPB15A6NHN6 443 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 A6NNZ2 444 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 FPGTO14772 594 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 LZTS3O60299 673 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 HEXIM1O94992 359 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 MT-CYBP00156 380 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 CTPS1P17812 591 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 MSNP26038 577 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 HNF1BP35680 557 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 CNGA3Q16281 694 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 ITPRIPL1Q6GPH6 555 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 KYAT3Q6YP21 454 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 CBARPQ8N350 705 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 LPCAT1Q8NF37 534 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 BMFQ96LC9 184 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 GDF3Q9NR23 364 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 FAM153AQ9UHL3 310 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 PYCARDQ9ULZ3 195 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 COQ6Q9Y2Z9 468 aa19.91■□□□□ 0.78
PDLIM2-207ENST00000409417 POM121BA6NF01 834 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 USP27XA6NNY8 438 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 ANKRD66B4E2M5 251 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 ENC1O14682 589 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 DFNA5O60443 496 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms