RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 S1PR4O95977 384 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TOP3BO95985 862 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CYBBP04839 570 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PRKCGP05129 697 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MYL2P10916 166 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 FGF3P11487 239 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MYL4P12829 197 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PTPN2P17706 415 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 COL9A1P20849 921 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SAT1P21673 171 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 GLDCP23378 1020 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PSMA3P25788 255 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC1A2P43004 574 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MAPK8P45983 427 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ERVFC1P60507 584 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ABCE1P61221 599 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ZXDBP98169 803 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DSG2Q14126 1118 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PCLAFQ15004 111 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TAF1AQ15573 450 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DLG2Q15700 870 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 FAM83EQ2M2I3 478 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 FSCBQ5H9T9 825 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 AGAP9Q5VTM2 703 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 UBE2Q1Q7Z7E8 422 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TBC1D1Q86TI0 1168 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MTDHQ86UE4 582 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TMC8Q8IU68 726 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MFN1Q8IWA4 741 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 NPAS3Q8IXF0 933 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 HS6ST3Q8IZP7 471 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PLD6Q8N2A8 252 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 GPATCH11Q8N954 259 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DCAF4L2Q8NA75 395 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TDRD5Q8NAT2 981 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 LEMD2Q8NC56 503 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 OR6Y1Q8NGX8 325 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 OR4L1Q8NH43 312 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 RFWD2Q8NHY2 731 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 FIBINQ8TAL6 211 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TTC8Q8TAM2 541 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PIWIL2Q8TC59 973 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SPPL3Q8TCT6 385 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 BLOC1S5Q8TDH9 187 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MICAL1Q8TDZ2 1067 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 KLHL29Q96CT2 875 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ERP27Q96DN0 273 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ALG14Q96F25 216 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ELMO2Q96JJ3 720 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TBATAQ96M53 351 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TCF12Q99081 682 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 OMDQ99983 421 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MRPL57Q9BQC6 102 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CORO1BQ9BR76 489 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC46A2Q9BY10 475 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 WWP1Q9H0M0 922 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MYLK2Q9H1R3 596 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 STN1Q9H668 368 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 NLE1Q9NVX2 485 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF358Q9NW07 568 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 OXSMQ9NWU1 459 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 HACD3Q9P035 362 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 KIAA1522Q9P206 1035 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CFAP97Q9P2B7 532 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DNMT3BQ9UBC3 853 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 HEY2Q9UBP5 337 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DPP7Q9UHL4 492 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ZMYM5Q9UJ78 669 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ZFP69BQ9UJL9 534 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ARHGAP26Q9UNA1 814 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 RAI2Q9Y5P3 530 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MICAL3Q7RTP6 2002 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 KIAA0100Q14667 2235 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 TANC1Q9C0D5 1861 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 COL4A6Q14031 1691 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CCDC195A0A1B0GUA6 201 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 A0A1W2PRU2 124 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ANKRD66B4E2M5 251 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 G3V2L1 256 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 TRAFD1O14545 582 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CD3EAPO15446 510 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 PHGDHO43175 533 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 SNAP91O60641 907 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CD160O95971 181 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 PRLP01236 227 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 RB1P06400 928 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 RBP1P09455 135 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 HNRNPA1P09651 372 aaKnown RBP eCLIP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC35E2BP0CK96 405 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 OGNP20774 298 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 LPOP22079 712 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 MZF1P28698 734 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 PMLP29590 882 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 HOXA9P31269 272 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CTNNB1P35222 781 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 AVPR1AP37288 418 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ABCG1P45844 678 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 RGRP47804 291 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CSNK1DP48730 415 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms