RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TNNI3P19429 210 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 ABCG1P45844 678 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 RTP1P59025 263 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 LSM12Q3MHD2 195 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 PTCHD4Q6ZW05 846 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 SAPCD2Q86UD0 394 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 CUZD1Q86UP6 607 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 CPSF7Q8N684 471 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 CDYL2Q8N8U2 506 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 HAVCR1Q96D42 359 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 PPP2R3BQ9Y5P8 575 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 MDM4O15151 490 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 CSDE1O75534 798 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 TIPRLO75663 272 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 AKR1D1P51857 326 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 GTF2A2P52657 109 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 SCN1BQ07699 218 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 GALNT3Q14435 633 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 CENPNQ96H22 339 aaPredicted RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 OR52E6Q96RD3 313 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 OR10H3O60404 316 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 TULP3O75386 442 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 S100A6P06703 90 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 ADRB2P07550 413 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 TLX1P31314 330 aaPredicted RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 ATP13A4Q4VNC1 1196 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 HPS6Q86YV9 775 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 ZC3H7AQ8IWR0 971 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 CHPFQ8IZ52 775 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 NKD2Q969F2 451 aaPredicted RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 SLC9A7Q96T83 725 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 CIPCQ9C0C6 399 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 RCOR3Q9P2K3 495 aaPredicted RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 SLC12A4Q9UP95 1085 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 VWA7Q9Y334 891 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 ARHGEF33A8MVX0 844 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 SLC22A2O15244 555 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 CHST10O43529 356 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 SIN3BO75182 1162 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 KHDRBS3O75525 346 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 TUFMP49411 452 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 DSG4Q86SJ6 1040 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 PCSK9Q8NBP7 692 aaKnown RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 ADAM32Q8TC27 787 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 FNDC11Q9BVV2 318 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 CXorf21Q9HAI6 301 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 CASTOR2A6NHX0 329 aa13□□□□□ -0.33
RNF43-201ENST00000407977 MTAPQ13126 283 aa13□□□□□ -0.33
RNF43-201ENST00000407977 KLHL24Q6TFL4 600 aa13□□□□□ -0.33
RNF43-201ENST00000407977 ARMCX6Q7L4S7 300 aa13□□□□□ -0.33
RNF43-201ENST00000407977 MEIOBQ8N635 442 aa13□□□□□ -0.33
RNF43-201ENST00000407977 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
RNF43-201ENST00000407977 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PTCD2Q8WV60 388 aaKnown RBP13□□□□□ -0.33
RNF43-201ENST00000407977 OMDQ99983 421 aa13□□□□□ -0.33
RNF43-201ENST00000407977 CHCHD6Q9BRQ6 235 aa13□□□□□ -0.33
RNF43-201ENST00000407977 MECRQ9BV79 373 aa13□□□□□ -0.33
RNF43-201ENST00000407977 C2orf49Q9BVC5 232 aaPredicted RBP13□□□□□ -0.33
RNF43-201ENST00000407977 OSBPL7Q9BZF2 842 aa13□□□□□ -0.33
RNF43-201ENST00000407977 EGFL7Q9UHF1 273 aa13□□□□□ -0.33
RNF43-201ENST00000407977 FGRP09769 529 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
RNF43-201ENST00000407977 PSMA1P25786 263 aaKnown RBP13□□□□□ -0.33
RNF43-201ENST00000407977 CD86P42081 329 aa13□□□□□ -0.33
RNF43-201ENST00000407977 CASP7P55210 303 aa13□□□□□ -0.33
RNF43-201ENST00000407977 USP4Q13107 963 aa13□□□□□ -0.33
RNF43-201ENST00000407977 NOMO1Q15155 1222 aa13□□□□□ -0.33
RNF43-201ENST00000407977 C12orf50Q8NA57 414 aaPredicted RBP13□□□□□ -0.33
RNF43-201ENST00000407977 RAB2BQ8WUD1 216 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PIH1D2Q8WWB5 315 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PIK3R3Q92569 461 aa13□□□□□ -0.33
RNF43-201ENST00000407977 B3GALT6Q96L58 329 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
RNF43-201ENST00000407977 NPAS2Q99743 824 aa13□□□□□ -0.33
RNF43-201ENST00000407977 CIB1Q99828 191 aa13□□□□□ -0.33
RNF43-201ENST00000407977 FETUBQ9UGM5 382 aa13□□□□□ -0.33
RNF43-201ENST00000407977 ADGRE2Q9UHX3 823 aa13□□□□□ -0.33
RNF43-201ENST00000407977 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
RNF43-201ENST00000407977 DNM1LO00429 736 aa13□□□□□ -0.33
RNF43-201ENST00000407977 MPZL2O60487 215 aa13□□□□□ -0.33
RNF43-201ENST00000407977 USP17L7P0C7H9 530 aa13□□□□□ -0.33
RNF43-201ENST00000407977 RPS9P46781 194 aaKnown RBP13□□□□□ -0.33
RNF43-201ENST00000407977 HSF2Q03933 536 aa13□□□□□ -0.33
RNF43-201ENST00000407977 SKIV2LQ15477 1246 aaKnown RBP13□□□□□ -0.33
RNF43-201ENST00000407977 PTPRNQ16849 979 aa13□□□□□ -0.33
RNF43-201ENST00000407977 CCNYL2Q5T2Q4 361 aa13□□□□□ -0.33
RNF43-201ENST00000407977 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PIGWQ7Z7B1 504 aa13□□□□□ -0.33
RNF43-201ENST00000407977 HAS1Q92839 578 aa13□□□□□ -0.33
RNF43-201ENST00000407977 ZBTB45Q96K62 511 aaPredicted RBP13□□□□□ -0.33
RNF43-201ENST00000407977 POLLQ9UGP5 575 aa13□□□□□ -0.33
RNF43-201ENST00000407977 LSM1O15116 133 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms