RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MRGBPQ9NV56 204 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 TMEM161AQ9NX61 479 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 SLC27A5Q9Y2P5 690 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 KCTD3Q9Y597 815 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 TLL2Q9Y6L7 1015 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 OR51F1A6NGY5 319 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 CASQ2O14958 399 aaPredicted RBP16.9■□□□□ 0.3
NUP50-203ENST00000407019 PRAMEF11O60813 436 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 HLA-DPA1P20036 260 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 PLK1P53350 603 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 LAMB3Q13751 1172 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 ZNF235Q14590 738 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 RFTN1Q14699 578 aaPredicted RBP16.9■□□□□ 0.3
NUP50-203ENST00000407019 TRIP10Q15642 601 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 SFT2D3Q587I9 215 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 OR52E8Q6IFG1 317 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 ABI1Q8IZP0 508 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 SPPL2BQ8TCT7 592 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 B3GALT6Q96L58 329 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 PPP1R12CQ9BZL4 782 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 EBF3Q9H4W6 596 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 MEAF6Q9HAF1 191 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 BCAP29Q9UHQ4 241 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 CASP8AP2Q9UKL3 1982 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 MTMR11A4FU01 709 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 CFLARO15519 480 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 FGF1P05230 155 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 UBTFL6P0CB48 400 aaPredicted RBP16.9■□□□□ 0.3
NUP50-203ENST00000407019 HSPA1AP0DMV8 641 aaKnown RBP16.9■□□□□ 0.3
NUP50-203ENST00000407019 HSPA1BP0DMV9 641 aaKnown RBP16.9■□□□□ 0.3
NUP50-203ENST00000407019 CAP1Q01518 475 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 ACVR1Q04771 509 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 GALNT1Q10472 559 aaPredicted RBP16.9■□□□□ 0.3
NUP50-203ENST00000407019 GPR158Q5T848 1215 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 NADSYN1Q6IA69 706 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 PHF21BQ96EK2 531 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 SPATA17Q96L03 361 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 GPR62Q9BZJ7 368 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 ALG9Q9H6U8 611 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
NUP50-203ENST00000407019 PSMD13Q9UNM6 376 aa16.9■□□□□ 0.3
NUP50-203ENST00000407019 BPTFQ12830 3046 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 TCAF2A6NFQ2 919 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 LYNP07948 512 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 COL6A1P12109 1028 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 XRCC1P18887 633 aaPredicted RBP16.89■□□□□ 0.29
NUP50-203ENST00000407019 TACR2P21452 398 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 FGFR3P22607 806 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 PKNOX1P55347 436 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 FLOT2Q14254 428 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 TMEM207Q6UWW9 146 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 CHSY3Q70JA7 882 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 BLOC1S5Q8TDH9 187 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 PEX13Q92968 403 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 MYEOVQ96EZ4 313 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 TBATAQ96M53 351 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 TRMOQ9BU70 441 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 TNFRSF12AQ9NP84 129 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 COMMD8Q9NX08 183 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 C6orf203Q9P0P8 240 aaPredicted RBP16.89■□□□□ 0.29
NUP50-203ENST00000407019 VWA8A3KMH1 1905 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 MUSKO15146 869 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 PEX1O43933 1283 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 GJB3O75712 270 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 GLP2RO95838 553 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 GOT2P00505 430 aaKnown RBP16.89■□□□□ 0.29
NUP50-203ENST00000407019 PENKP01210 267 aaPredicted RBP16.89■□□□□ 0.29
NUP50-203ENST00000407019 IMPDH1P20839 514 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 FDXRP22570 491 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 INHBCP55103 352 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 MTA1Q13330 715 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 CEACAM7Q14002 265 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 SQLEQ14534 574 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 GK5Q6ZS86 529 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 RPS27LQ71UM5 84 aaKnown RBP16.89■□□□□ 0.29
NUP50-203ENST00000407019 PIM3Q86V86 326 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 USP13Q92995 863 aaPredicted RBP16.89■□□□□ 0.29
NUP50-203ENST00000407019 DNAJC1Q96KC8 554 aaKnown RBP16.89■□□□□ 0.29
NUP50-203ENST00000407019 NPAS2Q99743 824 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 YIPF3Q9GZM5 350 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 CRISPLD1Q9H336 500 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 GSTO2Q9H4Y5 243 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 CCSER2Q9H7U1 834 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 PDP2Q9P2J9 529 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 CRYL1Q9Y2S2 319 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 ARL5AQ9Y689 179 aa16.89■□□□□ 0.29
NUP50-203ENST00000407019 MOXD2PA6NHM9 499 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 F5H5T6 163 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 TLR5O60602 858 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 RPP40O75818 363 aaKnown RBP16.88■□□□□ 0.29
NUP50-203ENST00000407019 SLC4A1P02730 911 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 HOXB8P17481 243 aaPredicted RBP16.88■□□□□ 0.29
NUP50-203ENST00000407019 ME2P23368 584 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 DPP6P42658 865 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 KPNA1P52294 538 aaPredicted RBP16.88■□□□□ 0.29
NUP50-203ENST00000407019 AQP4P55087 323 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 GPR17Q13304 367 aa16.88■□□□□ 0.29
NUP50-203ENST00000407019 BTG3Q14201 252 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms