RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 FAM155BO75949 473 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 ATP5BP06576 529 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 MDH1P40925 334 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 CTSOP43234 321 aaPredicted RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 GRIA4P48058 902 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 STK19P49842 368 aaPredicted RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 CSE1LP55060 971 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 RAD51Q06609 339 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 THOC5Q13769 683 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 GRM3Q14832 879 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 UGP2Q16851 508 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 HSP90AA5PQ58FG0 334 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 TEDDM1Q5T9Z0 273 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 ESRP1Q6NXG1 681 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 SUGP1Q8IWZ8 645 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 PLPP6Q8IY26 295 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 LPCAT1Q8NF37 534 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 ZFYVE19Q96K21 471 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 RPL10LQ96L21 214 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 ZNF778Q96MU6 729 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 SRPK1Q96SB4 655 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 EBF3Q9H4W6 596 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 ECT2Q9H8V3 914 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 KCNK9Q9NPC2 374 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 HEBP1Q9NRV9 189 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 NKIRAS1Q9NYS0 192 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 RAPGEFL1Q9UHV5 662 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 TMEM120BA0PK00 339 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 ANKRD66B4E2M5 251 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 TRIM49D1C9J1S8 452 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 ARNTLO00327 626 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 PRPF4O43172 522 aaKnown RBP eCLIP21.1■□□□□ 0.97
TPM1-208ENST00000404484 VAPBO95292 243 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 PRLP01236 227 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 SRPRAP08240 638 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 COL9A1P20849 921 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 SERPINA4P29622 427 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 SLC18A1P54219 525 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 EPHB1P54762 984 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 PDE1BQ01064 536 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 CNGA3Q16281 694 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 DGKKQ5KSL6 1271 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 CWF19L1Q69YN2 538 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 CNTN4Q8IWV2 1026 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 ETFBKMTQ8IXQ9 262 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 RYBPQ8N488 228 aaPredicted RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 STYXQ8WUJ0 223 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 PDCD6IPQ8WUM4 868 aaKnown RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 MYO19Q96H55 970 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 NSMCE3Q96MG7 304 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 EVLQ9UI08 416 aaPredicted RBP21.1■□□□□ 0.97
TPM1-208ENST00000404484 ERVW-1Q9UQF0 538 aa21.1■□□□□ 0.97
TPM1-208ENST00000404484 MYLKQ15746 1914 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 STK25O00506 426 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 SLC7A4O43246 635 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 LDB2O43679 373 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 PI15O43692 258 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 UGT1A9O60656 530 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 TULP3O75386 442 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 ZNF821O75541 412 aaPredicted RBP21.09■□□□□ 0.97
TPM1-208ENST00000404484 PGLSO95336 258 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 CISD3P0C7P0 127 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 AVPR2P30518 371 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 SPRP35270 261 aaPredicted RBP21.09■□□□□ 0.97
TPM1-208ENST00000404484 RECQLP46063 649 aaPredicted RBP21.09■□□□□ 0.97
TPM1-208ENST00000404484 ARCN1P48444 511 aaKnown RBP21.09■□□□□ 0.97
TPM1-208ENST00000404484 STARD6P59095 220 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 MLF2Q15773 248 aaPredicted RBP21.09■□□□□ 0.97
TPM1-208ENST00000404484 ACCSLQ4AC99 568 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 GRAMD4Q6IC98 578 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 TIFABQ6ZNK6 161 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 LMNTD2Q8IXW0 634 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 DNASE1L2Q92874 299 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 CENPTQ96BT3 561 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 TNKS2Q9H2K2 1166 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 TBC1D17Q9HA65 648 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 UGT1A7Q9HAW7 530 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 UGT1A10Q9HAW8 530 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 UGT1A8Q9HAW9 530 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 TRPV5Q9NQA5 729 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 IARS2Q9NSE4 1012 aaKnown RBP21.09■□□□□ 0.97
TPM1-208ENST00000404484 DEC1Q9P2X7 70 aa21.09■□□□□ 0.97
TPM1-208ENST00000404484 CCDC78A2IDD5 438 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 FAM47DPA6NHR8 397 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 C2orf81A6NN90 581 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 HTRA2O43464 458 aaPredicted RBP21.08■□□□□ 0.97
TPM1-208ENST00000404484 TIMM44O43615 452 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 FZD6O60353 706 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 SHOX2O60902 331 aaPredicted RBP21.08■□□□□ 0.97
TPM1-208ENST00000404484 SIN3BO75182 1162 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 KRT4P19013 534 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 CLCN5P51795 746 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 ACVR1Q04771 509 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 ILF2Q12905 390 aaKnown RBP21.08■□□□□ 0.97
TPM1-208ENST00000404484 EIF4HQ15056 248 aaKnown RBP21.08■□□□□ 0.97
TPM1-208ENST00000404484 TAF1AQ15573 450 aaPredicted RBP21.08■□□□□ 0.97
TPM1-208ENST00000404484 DLG2Q15700 870 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 GEN1Q17RS7 908 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 MYLK3Q32MK0 819 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 CARD16Q5EG05 197 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms