RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SLC35F3Q8IY50 421 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 PGBD5Q8N414 524 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 PAF1Q8N7H5 531 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 ZNF564Q8TBZ8 553 aaPredicted RBP15.45■□□□□ 0.06
TPM1-207ENST00000403994 MAPK15Q8TD08 544 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 HNRNPLLQ8WVV9 542 aaKnown RBP15.45■□□□□ 0.06
TPM1-207ENST00000403994 DCBLD2Q96PD2 775 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 DEPDC7Q96QD5 511 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 MGME1Q9BQP7 344 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 XPO4Q9C0E2 1151 aaKnown RBP15.45■□□□□ 0.06
TPM1-207ENST00000403994 SALL4Q9UJQ4 1053 aa15.45■□□□□ 0.06
TPM1-207ENST00000403994 CFAP46Q8IYW2 2715 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 TTC24A2A3L6 582 aaPredicted RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 CFAP69A5D8W1 941 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 TMEM110-MUSTN1A8MSY1 372 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 HTRA2O43464 458 aaPredicted RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 MFSD11O43934 449 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 SOCS5O75159 536 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 RECQL5O94762 991 aaPredicted RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 GM2AP17900 193 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 PTMSP20962 102 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 HSPA9P38646 679 aaKnown RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 HK3P52790 923 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 ADKP55263 362 aaKnown RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 CDH6P55285 790 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 KRT81Q14533 505 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 TCEA2Q15560 299 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 CCDC122Q5T0U0 273 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 KCTD16Q68DU8 428 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 LIPIQ6XZB0 460 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 EFL1Q7Z2Z2 1120 aaKnown RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 PDZD3Q86UT5 571 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 CPNE8Q86YQ8 564 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 HID1Q8IV36 788 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 FSTL5Q8N475 847 aaPredicted RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 PLA2G15Q8NCC3 412 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 PCDH19Q8TAB3 1148 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 FAM71BQ8TC56 605 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 PDXPQ96GD0 296 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 APOOQ9BUR5 198 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 RCOR3Q9P2K3 495 aaPredicted RBP15.44■□□□□ 0.06
TPM1-207ENST00000403994 B4GALT6Q9UBX8 382 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 KLQ9UEF7 1012 aa15.44■□□□□ 0.06
TPM1-207ENST00000403994 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.43■□□□□ 0.06
TPM1-207ENST00000403994 CPED1A4D0V7 1026 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 EME2A4GXA9 379 aaPredicted RBP15.43■□□□□ 0.06
TPM1-207ENST00000403994 MYO1FO00160 1098 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 CSO75390 466 aaKnown RBP15.43■□□□□ 0.06
TPM1-207ENST00000403994 RASGRP1O95267 797 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 CPP00450 1065 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 TPM3P06753 285 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 ANXA6P08133 673 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 CD48P09326 243 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 TGM2P21980 687 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 HTR1BP28222 390 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 HNRNPH3P31942 346 aaKnown RBP15.43■□□□□ 0.06
TPM1-207ENST00000403994 GJC1P36383 396 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 MMP13P45452 471 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 BLKP51451 505 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 KIAA1024LP59773 190 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 POLR2LP62875 67 aaKnown RBP15.43■□□□□ 0.06
TPM1-207ENST00000403994 MMRN1Q13201 1228 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 PERM1Q5SV97 790 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 KYQ8NBH2 561 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 SNIP1Q8TAD8 396 aaKnown RBP15.43■□□□□ 0.06
TPM1-207ENST00000403994 TSACCQ96A04 125 aaPredicted RBP15.43■□□□□ 0.06
TPM1-207ENST00000403994 CRELD1Q96HD1 420 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 WDR92Q96MX6 357 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 NUDCD1Q96RS6 583 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 ABCG4Q9H172 646 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 NOD2Q9HC29 1040 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 BAHCC1Q9P281 2608 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 KIF26BQ2KJY2 2108 aa15.43■□□□□ 0.06
TPM1-207ENST00000403994 FASNP49327 2511 aaKnown RBP15.42■□□□□ 0.06
TPM1-207ENST00000403994 YY2O15391 372 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 ALPIP09923 528 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 IL4RP24394 825 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 SSR1P43307 286 aaKnown RBP15.42■□□□□ 0.06
TPM1-207ENST00000403994 ABCG1P45844 678 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 ARSEP51690 589 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 SRP54P61011 504 aaKnown RBP15.42■□□□□ 0.06
TPM1-207ENST00000403994 MAXP61244 160 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 TRAF2Q12933 501 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 DPYSL3Q14195 570 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 ELOCQ15369 112 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 CNGA3Q16281 694 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 TBC1D25Q3MII6 688 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 ESRP1Q6NXG1 681 aaKnown RBP15.42■□□□□ 0.06
TPM1-207ENST00000403994 CRTC1Q6UUV9 634 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 ENPP7Q6UWV6 458 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 BBS5Q8N3I7 341 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 ARL10Q8N8L6 244 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 ATL2Q8NHH9 583 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 PDCD6IPQ8WUM4 868 aaKnown RBP15.42■□□□□ 0.06
TPM1-207ENST00000403994 GLMNQ92990 594 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 NAT6Q93015 286 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 FUBP1Q96AE4 644 aaKnown RBP15.42■□□□□ 0.06
TPM1-207ENST00000403994 DNAJC7Q99615 494 aa15.42■□□□□ 0.06
TPM1-207ENST00000403994 PACSIN1Q9BY11 444 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms