RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NUDT21O43809 227 aaKnown RBP11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 F9P00740 461 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TNFP01375 233 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FGF1P05230 155 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MPSTP25325 297 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OAS2P29728 719 aaKnown RBP11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 UQCRFS1P47985 274 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CD97P48960 835 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LIG3P49916 1009 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NR1D2Q14995 579 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 AGERQ15109 404 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CYTH1Q15438 398 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM102AQ5T9C2 384 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NKAIN2Q5VXU1 208 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 EMC1Q8N766 993 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ARHGEF26Q96DR7 871 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ABHD17AQ96GS6 310 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 EXOC2Q96KP1 924 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TAAR9Q96RI9 348 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TTYH3Q9C0H2 523 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CDH19Q9H159 772 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM248Q9NWD8 314 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 STAP1Q9ULZ2 295 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CTNND2Q9UQB3 1225 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MFHAS1Q9Y4C4 1052 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PAXBP1Q9Y5B6 917 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SETD2Q9BYW2 2564 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 AKAP9Q99996 3911 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LOC101059948A0A1B0GTJ6 334 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TSPAN11A1L157 253 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GOLGA8SH3BPF8 625 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 KDELR3O43731 214 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RAD1O60671 282 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LRIG2O94898 1065 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CPNE6O95741 557 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PRKAR1AP10644 381 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RHOQP17081 205 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PON1P27169 355 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CDH5P33151 784 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MMP12P39900 470 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CCR10P46092 362 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RGRP47804 291 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MLLT10P55197 1068 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NRG1Q02297 640 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RALGDSQ12967 914 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MTM1Q13496 603 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ARHGEF7Q14155 803 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C15orf59Q2T9L4 293 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MAP9Q49MG5 647 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ENOSF1Q7L5Y1 443 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TIPARPQ7Z3E1 657 aaKnown RBP11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PIM3Q86V86 326 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 UNC5BQ8IZJ1 945 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CACNA2D3Q8IZS8 1091 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 BMPERQ8N8U9 685 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OR56A4Q8NGH8 313 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C9orf43Q8TAL5 461 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ART4Q93070 314 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 HMCESQ96FZ2 354 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C1QTNF7Q9BXJ2 289 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MAGEH1Q9H213 219 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DPEP2Q9H4A9 486 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SYNCQ9H7C4 482 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 APEX2Q9UBZ4 518 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PILRAQ9UKJ1 303 aa11.96□□□□□ -0.49
SPTLC1P3-201ENST00000403408 APCP25054 2843 aa11.96□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PPM1DO15297 605 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 HTR1BP28222 390 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ADRA1BP35368 520 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TRIM23P36406 574 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SCNN1AP37088 669 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 MAPKAPK2P49137 400 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 LIMK2P53671 638 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 KIAA1024LP59773 190 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ATP11AP98196 1134 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 UGP2Q16851 508 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CCDC14Q49A88 953 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RWDD4Q6NW29 188 aaKnown RBP11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ZDHHC17Q8IUH5 632 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PYROXD2Q8N2H3 581 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 IL22RA1Q8N6P7 574 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CCDC185Q8N715 623 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 C18orf8Q96DM3 657 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SLC45A3Q96JT2 553 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GDAP1L1Q96MZ0 367 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CYP4F12Q9HCS2 524 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 KCNK4Q9NYG8 393 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PLEKHB1Q9UF11 243 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 OR12D3Q9UGF7 316 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TNRC6AQ8NDV7 1962 aaKnown RBP11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CELSR1Q9NYQ6 3014 aa11.95□□□□□ -0.5
SPTLC1P3-201ENST00000403408 HGSO14964 777 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 BUB1O43683 1085 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RAMP2O60895 175 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RECQL5O94762 991 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SMC2O95347 1197 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms