RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 FAM50BQ9Y247 325 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 KCTD3Q9Y597 815 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 COL11A2P13942 1736 aaPredicted RBP9.21□□□□□ -0.94
HPS4-203ENST00000402105 TOMM70O94826 608 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 DPYSQ14117 519 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 AARS2Q5JTZ9 985 aaKnown RBP9.21□□□□□ -0.94
HPS4-203ENST00000402105 PRAMEF19Q5SWL8 479 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 DPP9Q86TI2 863 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 RETREG3Q86VR2 466 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 TMEM151AQ8N4L1 468 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 DHRSXQ8N5I4 330 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 PAF1Q8N7H5 531 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 PTGR2Q8N8N7 351 aaPredicted RBP9.21□□□□□ -0.94
HPS4-203ENST00000402105 HDAC10Q969S8 669 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 ZNF597Q96LX8 424 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 NPY6RQ99463 290 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 DNAI2Q9GZS0 605 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 PCDH12Q9NPG4 1184 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 MRPL40Q9NQ50 206 aaKnown RBP9.21□□□□□ -0.94
HPS4-203ENST00000402105 EXD2Q9NVH0 621 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 NDUFAF1Q9Y375 327 aa9.21□□□□□ -0.94
HPS4-203ENST00000402105 MAGED1Q9Y5V3 778 aaPredicted RBP9.21□□□□□ -0.94
HPS4-203ENST00000402105 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 MEIS3P2A8K0S8 358 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SOCS7O14512 581 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 GNGT2O14610 69 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 USP2O75604 605 aaPredicted RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 HMBSP08397 361 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 CYP2C9P11712 490 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 NFKBIAP25963 317 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 HMOX2P30519 316 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 KCNC1P48547 511 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 FOXA1P55317 472 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 LILRA4P59901 499 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 LRP8Q14114 963 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 FRG1Q14331 258 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 NR1D2Q14995 579 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 NOTUMQ6P988 496 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 GALNT18Q6P9A2 607 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 TICAM1Q8IUC6 712 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 ZC3H7AQ8IWR0 971 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 SH3RF2Q8TEC5 729 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 NUDT8Q8WV74 236 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 C19orf60Q96EN9 201 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 NDFIP2Q9NV92 336 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 PLK2Q9NYY3 685 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 PKD2L2Q9NZM6 624 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SH3GLB1Q9Y371 365 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SCN1AP35498 2009 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SUPT3HB4E1H0 165 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 PIP5K1BO14986 540 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 DAB1O75553 588 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 ALDH4A1P30038 563 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 HOXA11P31270 313 aaPredicted RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 KPNA2P52292 529 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 DIO3P55073 304 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 PAFAH1B3Q15102 231 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 OTUD1Q5VV17 481 aaPredicted RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 LINC00523Q86TU6 105 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 STK32CQ86UX6 486 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SCN4BQ8IWT1 228 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 CMTR2Q8IYT2 770 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 CPSF7Q8N684 471 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 SMYD1Q8NB12 490 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 LPPQ93052 612 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 B3GALT6Q96L58 329 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SNX27Q96L92 541 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 C12orf42Q96LP6 360 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 ZNF560Q96MR9 790 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 FANCEQ9HB96 536 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 LTB4R2Q9NPC1 389 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SUCOQ9UBS9 1254 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 PTPRFP10586 1907 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 UBXN8O00124 270 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 AGRPO00253 132 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 NME4O00746 187 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 KPNA6O60684 536 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 LTA4HP09960 611 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 EDNRBP24530 442 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 CCR1P32246 355 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SLC26A2P50443 739 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 AFF1P51825 1210 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 CTBSQ01459 385 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 RAB39AQ14964 217 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 MAPK11Q15759 364 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 EGFLAMQ63HQ2 1017 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 DNAJC14Q6Y2X3 702 aaPredicted RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 SAPCD2Q86UD0 394 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 CARM1Q86X55 608 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 TMCO5AQ8N6Q1 288 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 SCAMP5Q8TAC9 235 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 GABPB2Q8TAK5 448 aaPredicted RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 HMGCLL1Q8TB92 370 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 RDH11Q8TC12 318 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 CAMKK2Q96RR4 588 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 KCTD14Q9BQ13 255 aaPredicted RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 TRHDEQ9UKU6 1024 aa9.2□□□□□ -0.94
HPS4-203ENST00000402105 AAR2Q9Y312 384 aaKnown RBP9.2□□□□□ -0.94
HPS4-203ENST00000402105 NFKBIEO00221 500 aa9.19□□□□□ -0.94
HPS4-203ENST00000402105 UBFD1O14562 309 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms