RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 MOXD1Q6UVY6 613 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 PEG10Q86TG7 708 aaKnown RBP13.81□□□□□ -0.2
VAPA-202ENST00000400000 C10orf107Q8IVU9 208 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 SVOPQ8N4V2 548 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 NLGN2Q8NFZ4 835 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 PHF10Q8WUB8 498 aaKnown RBP13.81□□□□□ -0.2
VAPA-202ENST00000400000 SLC9A6Q92581 669 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 ARMC5Q96C12 935 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 EPS8L2Q9H6S3 715 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 ABCB10Q9NRK6 738 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 PSME2Q9UL46 239 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 CPSF4LA6NMK7 179 aaKnown RBP13.81□□□□□ -0.2
VAPA-202ENST00000400000 H3BMM5 538 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 TIPRLO75663 272 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 C4BPBP20851 252 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 NT5EP21589 574 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 MAPKAPK3Q16644 382 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 UBE2R2Q712K3 238 aaPredicted RBP13.81□□□□□ -0.2
VAPA-202ENST00000400000 ZNF540Q8NDQ6 660 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 NELL1Q92832 810 aa13.81□□□□□ -0.2
VAPA-202ENST00000400000 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 C9IYK1 514 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 AREL1O15033 823 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 RPL9P32969 192 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 CTSOP43234 321 aaPredicted RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 GJA9P57773 515 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 RIOX2Q8IUF8 465 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 C7orf57Q8NEG2 295 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 OR8D1Q8WZ84 308 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 EVA1BQ9NVM1 165 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 GMPPBQ9Y5P6 360 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 NRP2O60462 931 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 FSBPO95073 299 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 CST1P01037 141 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 YAP1P46937 504 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 GAL3ST4Q96RP7 486 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 GPER1Q99527 375 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 DPEP2Q9H4A9 486 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 NMUR1Q9HB89 426 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 TPRKBQ9Y3C4 175 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 MED26O95402 600 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 HGFP14210 728 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 SKP1P63208 163 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 CAPSQ13938 189 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 CXorf57Q6NSI4 855 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 PMF1Q6P1K2 205 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 ATAD1Q8NBU5 361 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 FBXO15Q8NCQ5 510 aaPredicted RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 INTS7Q9NVH2 962 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 USP31Q70CQ4 1352 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 DLG2Q15700 870 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 PAPD7Q5XG87 772 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 PPP2R2DQ66LE6 453 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 PRMT9Q6P2P2 845 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 TMEM86AQ8N2M4 240 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 NAXEQ8NCW5 288 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 FAM110BQ8TC76 370 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 NKD1Q969G9 470 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 FCRL4Q96PJ5 515 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 TCF25Q9BQ70 676 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 CDT1Q9H211 546 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 CNTNAP1P78357 1384 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 H3BSH0 61 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 SLC31A1O15431 190 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 PBX3P40426 434 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 CCT3P49368 545 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 HNMTP50135 292 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 USP4Q13107 963 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 MED22Q15528 200 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 AFTPHQ6ULP2 937 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 LZTR1Q8N653 840 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 ETNPPLQ8TBG4 499 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 RPL10LQ96L21 214 aaKnown RBP13.8□□□□□ -0.2
VAPA-202ENST00000400000 FAIM2Q9BWQ8 316 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 CLN6Q9NWW5 311 aa13.8□□□□□ -0.2
VAPA-202ENST00000400000 DISP2A7MBM2 1401 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 SH3D21A4FU49 640 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 UGT2B4P06133 528 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 FOSL2P15408 326 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 ICAM3P32942 547 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 ACAP2Q15057 778 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 RALGPS2Q86X27 583 aaPredicted RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 HBEGFQ99075 208 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 FANCEQ9HB96 536 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 HACD1B0YJ81 288 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 EIF4BP23588 611 aaKnown RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 PGDP52209 483 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.79□□□□□ -0.23e-6■■■□□ 19
VAPA-202ENST00000400000 TMEM119Q4V9L6 283 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 SPANXN2Q5MJ10 180 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CHERPQ8IWX8 916 aaKnown RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 ZNF248Q8NDW4 579 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 C5orf34Q96MH7 638 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms