RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MT-ND1P03886 318 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 FGFR1P11362 822 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 GRIA1P42261 906 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ABL2P42684 1182 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ATP6V0D1P61421 351 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 HERC3Q15034 1050 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 LDLRAP1Q5SW96 308 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 TRIQKQ629K1 86 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 OR2T12Q8NG77 320 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 UBASH3BQ8TF42 649 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 POP5Q969H6 163 aaKnown RBP11.1□□□□□ -0.63
HPS4-202ENST00000398145 FBXO44Q9H4M3 255 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ABCC13Q9NSE7 274 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 GPR182O15218 404 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 RNASEH1O60930 286 aaKnown RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 THRBP10828 461 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 IL12AP29459 219 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 CHI3L1P36222 383 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 GPD2P43304 727 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 HPCAP84074 193 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PTPRNQ16849 979 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 IL23RQ5VWK5 629 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 ZNF549Q6P9A3 640 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 ATG14Q6ZNE5 492 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 KCTD8Q6ZWB6 473 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 CLEC4DQ8WXI8 215 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 C18orf25Q96B23 403 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 OMA1Q96E52 524 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUSP16Q9BY84 665 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 SH3BP4Q9P0V3 963 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 NPHS1O60500 1241 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PIK3CGP48736 1102 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 RHOAP61586 193 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 MED1Q15648 1581 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 ARHGAP17Q68EM7 881 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 KIAA0408Q6ZU52 694 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PLEKHM3Q6ZWE6 761 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PAGE2Q7Z2X7 111 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 RAB2BQ8WUD1 216 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 COPS5Q92905 334 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PPM1MQ96MI6 270 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 FANCEQ9HB96 536 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 CD320Q9NPF0 282 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 GIN1Q9NXP7 522 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 CNTN6Q9UQ52 1028 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 RIPK3Q9Y572 518 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DGKBQ9Y6T7 804 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 CENPXA8MT69 81 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 TSC22D2O75157 780 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 FARP2O94887 1054 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 GRM5P41594 1212 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 LIPEQ05469 1076 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 EN1Q05925 392 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 TRAP1Q12931 704 aaKnown RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 TRIP4Q15650 581 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 GPR162Q16538 588 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 NDUFA5Q16718 116 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 ZBED5Q49AG3 693 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 CLEC6AQ6EIG7 209 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 UNC5BQ8IZJ1 945 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PHF21AQ96BD5 680 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PKP2Q99959 881 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 GBA3Q9H227 469 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 ALG2Q9H553 416 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 TMA7Q9Y2S6 64 aaKnown RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 BAZ2AQ9UIF9 1905 aaKnown RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 A0A1B0GW55 424 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 ULK1O75385 1050 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 SERPIND1P05546 499 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUX4L2P0CJ85 424 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUX4L3P0CJ86 424 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUX4L4P0CJ87 422 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUX4L5P0CJ88 424 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUX4L6P0CJ89 424 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUX4L7P0CJ90 424 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 ZNF37AP17032 561 aaPredicted RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 TALDO1P37837 337 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 CAPGP40121 348 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 MPP1Q00013 466 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 SLC25A11Q02978 314 aaKnown RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 TSNQ15631 228 aaKnown RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 CA9Q16790 459 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PPM1LQ5SGD2 360 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 MFSD14CQ5VZR4 134 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 AKAP14Q86UN6 197 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 RIOX2Q8IUF8 465 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PYROXD2Q8N2H3 581 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 STK40Q8N2I9 435 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
HPS4-202ENST00000398145 BHMTQ93088 406 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DYRK4Q9NR20 520 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 OXSMQ9NWU1 459 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 SLC17A6Q9P2U8 582 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 DUX4Q9UBX2 424 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 RPS6KA6Q9UK32 745 aa11.09□□□□□ -0.63
HPS4-202ENST00000398145 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 C10orf71Q711Q0 1435 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 FAM220BPB1ANY3 271 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms