RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MAGEB16A2A368 324 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 GLTPD2A6NH11 291 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 PLOD2O00469 737 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 PIRO00625 290 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 NOL3O60936 208 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 PGK1P00558 417 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 HNRNPLP14866 589 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 NPR3P17342 541 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 ADCYAP1R1P41586 468 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 TKTL1P51854 596 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 TTC33Q6PID6 262 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 BNIPLQ7Z465 357 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 SNX31Q8N9S9 440 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 KDM1BQ8NB78 822 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 ZNF641Q96N77 438 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 OSMRQ99650 979 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 FTHL17Q9BXU8 183 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 MROQ9BYG7 248 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 IPO11Q9UI26 975 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 DAPK2Q9UIK4 370 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 ACOT9Q9Y305 439 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 SLCO1B7G3V0H7 640 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 TRIM38O00635 465 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 HUS1O60921 280 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 FYNP06241 537 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 HDCP19113 662 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 HOXD11P31277 338 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 CSRP3P50461 194 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 CCT8P50990 548 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 PSME3P61289 254 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 SOX4Q06945 474 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 RALGDSQ12967 914 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 POU6F1Q14863 301 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 TSTD2Q5T7W7 516 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 FAM219BQ5XKK7 198 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 CYP2U1Q7Z449 544 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 ZNF467Q7Z7K2 595 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 MFSD6LQ8IWD5 586 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 ZNF786Q8N393 782 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 CNTD1Q8N815 330 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 TNIP3Q96KP6 325 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 ULBP1Q9BZM6 244 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 DKK3Q9UBP4 350 aa16.06■□□□□ 0.16
CHMP1A-201ENST00000397901 SMIM28A0A1B0GU29 152 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 NEMP2A6NFY4 417 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 TRIM64A6NGJ6 449 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 UNCXA6NJT0 531 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 YJEFN3A6XGL0 299 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 ERI2A8K979 691 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 TARM1B6A8C7 271 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 SDHDO14521 159 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 ADSLP30566 484 aaPredicted RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 HNRNPFP52597 415 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 HK2P52789 917 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 CDH17Q12864 832 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 PMS2P3Q13401 168 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 TMEM26Q6ZUK4 368 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 IGFN1Q86VF2 1251 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 SPATA22Q8NHS9 363 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 LRTOMTQ8WZ04 291 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 HPS1Q92902 700 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 ZNF560Q96MR9 790 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 SLC2A13Q96QE2 648 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 TRPV6Q9H1D0 765 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 WDR6Q9NNW5 1121 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 CPQQ9Y646 472 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 E7ENX8 843 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 HADHAP40939 763 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 TAF6P49848 677 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 PRKAA2P54646 552 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 RFTN1Q14699 578 aaPredicted RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 RAB39AQ14964 217 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 NHSL2Q5HYW2 709 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 ALKAL1Q6UXT8 129 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 CLEC20AQ6ZU45 233 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 PAQR9Q6ZVX9 377 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 RPS27LQ71UM5 84 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 CADM3Q8N126 398 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 MINDY2Q8NBR6 621 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 TXNDC5Q8NBS9 432 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 PDPRQ8NCN5 879 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 ACDQ96AP0 544 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 SLC29A1Q99808 456 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 CYP4F12Q9HCS2 524 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 DDIT4Q9NX09 232 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 TIMM22Q9Y584 194 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 PCDHGA7Q9Y5G6 932 aa16.05■□□□□ 0.16
CHMP1A-201ENST00000397901 FAM95CA0A1B0GW59 222 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 DYNC1LI2O43237 492 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 ALOX5P09917 674 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 DMPKQ09013 629 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 TRAF2Q12933 501 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 NFATC3Q12968 1075 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 SEMA3BQ13214 749 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms