RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RNF208Q9H0X6 261 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TCF7L2Q9NQB0 619 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TMLHEQ9NVH6 421 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CNOT11Q9UKZ1 510 aaKnown RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 IGLV3-16A0A075B6K0 115 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TOR1BO14657 336 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CREB3O43889 395 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 MSH3P20585 1137 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 OR1D2P34982 312 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CD86P42081 329 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 HSPA13P48723 471 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SNCBQ16143 134 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 C10orf120Q5SQS8 335 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 PPP2R2DQ66LE6 453 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 PCYOX1LQ8NBM8 494 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ATL1Q8WXF7 558 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 GPR78Q96P69 363 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 FAM111AQ96PZ2 611 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CLSTN3Q9BQT9 956 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 GATA5Q9BWX5 397 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 OSBPL6Q9BZF3 934 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZFP69BQ9UJL9 534 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TSPAN11A1L157 253 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 INSIG1O15503 277 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 UBOX5O94941 541 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 F11P03951 625 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 MYL2P10916 166 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SESN2P58004 480 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 PFKPQ01813 784 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 LCP2Q13094 533 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 GPNMBQ14956 572 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 AGERQ15109 404 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TRMT10BQ6PF06 316 aaKnown RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CLYBLQ8N0X4 340 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 PPFIBP2Q8ND30 876 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF296Q8WUU4 475 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 RAB7BQ96AH8 199 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF333Q96JL9 665 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 MRGPRX2Q96LB1 330 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SLC29A3Q9BZD2 475 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 FBXO10Q9UK96 956 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 GIPC1O14908 333 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 LDB2O43679 373 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZMPSTE24O75844 475 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SOAT2O75908 522 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 GLP2RO95838 553 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CHEK2O96017 543 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ITGALP20701 1170 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SH3PXD2AQ5TCZ1 1133 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ICE2Q659A1 982 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF280BQ86YH2 543 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 GIMAP7Q8NHV1 300 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ULK4Q96C45 1275 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ATP13A3Q9H7F0 1226 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 EFCAB1Q9HAE3 211 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 LRCH1Q9Y2L9 728 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 OAS3Q9Y6K5 1087 aaKnown RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SLC12A8A0AV02 714 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 WDR27A2RRH5 827 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ANKRD66B4E2M5 251 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 STC2O76061 302 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 POMCP01189 267 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SLC35E2BP0CK96 405 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ESRRAP11474 423 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 MAD2L1Q13257 205 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 PLEKHG6Q3KR16 790 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 FAM133BQ5BKY9 247 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 DCLK2Q8N568 766 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GIPC2Q8TF65 315 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 TMA16Q96EY4 203 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RAD9AQ99638 391 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 PITHD1Q9GZP4 211 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 IL23AQ9NPF7 189 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 MGAT1P26572 445 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CCNHP51946 323 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ARHGAP15Q53QZ3 475 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 C4orf33Q8N1A6 199 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 LPGAT1Q92604 370 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 MCUR1Q96AQ8 359 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SCRN2Q96FV2 425 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 LRGUKQ96M69 825 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 BTBD10Q9BSF8 475 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 EFHD1Q9BUP0 239 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 NACA2Q9H009 215 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 NLE1Q9NVX2 485 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 INPP5FQ9Y2H2 1132 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CAPN14A8MX76 684 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 KERAO60938 352 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 WDR47O94967 919 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RPA3P35244 121 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SNRPD1P62314 119 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 NME3Q13232 169 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GRAMD4Q6IC98 578 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 PACRGLQ8N7B6 248 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 OR52K1Q8NGK4 314 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CDKN2AIPNLQ96HQ2 116 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RIC8BQ9NVN3 520 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 TAS2R1Q9NYW7 299 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SARDHQ9UL12 918 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms