RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ABCE1P61221 599 aaKnown RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CTBP1Q13363 440 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 GRM2Q14416 872 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 C2orf27AQ580R0 203 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 TMTC4Q5T4D3 741 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CASS4Q9NQ75 786 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CAPN7Q9Y6W3 813 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 SIPA1L1O43166 1804 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 TPP1O14773 563 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 GSTA4O15217 222 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PIK3CGP48736 1102 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CACNA2D1P54289 1103 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 IFI35P80217 286 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 TSTD2Q5T7W7 516 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PIK3R6Q5UE93 754 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 SNX30Q5VWJ9 437 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 BRAT1Q6PJG6 821 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ANGPTL8Q6UXH0 198 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PACS1Q6VY07 963 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 GDPD4Q6W3E5 623 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 MARK2Q7KZI7 788 aaKnown RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 SYTL1Q8IYJ3 562 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 MRPL40Q9NQ50 206 aaKnown RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PCDHB1Q9Y5F3 818 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 FAM72CH0Y354 149 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 FOSL2P15408 326 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ERVFC1P60507 584 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 RAB10P61026 200 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CACNG1Q06432 222 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PEX6Q13608 980 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 FAM72AQ5TYM5 149 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ANKS6Q68DC2 871 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 FAM72DQ6L9T8 149 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 TMEM173Q86WV6 379 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 FAM72BQ86X60 149 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 TDHQ8IZJ6 230 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 AP2M1Q96CW1 435 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CWH43Q9H720 699 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CDH7Q9ULB5 785 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 VWA7Q9Y334 891 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 MCM3APO60318 1980 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 ATG13O75143 517 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 SHBGP04278 402 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 ABCG1P45844 678 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 SERPINB4P48594 390 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 NTHL1P78549 312 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 EIF4HQ15056 248 aaKnown RBP8.3□□□□□ -1.08
PTPRD-204ENST00000397606 TAF1AQ15573 450 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-204ENST00000397606 CRY1Q16526 586 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 FNBP1LQ5T0N5 605 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 PRPF39Q86UA1 669 aaKnown RBP8.3□□□□□ -1.08
PTPRD-204ENST00000397606 GPSM1Q86YR5 675 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 FLCNQ8NFG4 579 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 IGSF8Q969P0 613 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 ACTR8Q9H981 624 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 TNPO3Q9Y5L0 923 aaKnown RBP8.3□□□□□ -1.08
PTPRD-204ENST00000397606 HIDE1A8MVS5 230 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 MEI4A8MW99 385 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 DCLK1O15075 740 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 GYG2O15488 501 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 CCDC166P0CW27 439 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 IRAK1P51617 712 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-204ENST00000397606 SGO1Q5FBB7 561 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 C22orf39Q6P5X5 142 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 TBATAQ96M53 351 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 TCF12Q99081 682 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 KXD1Q9BQD3 176 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 GRHL1Q9NZI5 618 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 IL36AQ9UHA7 158 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 CD207Q9UJ71 328 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 RAB23Q9ULC3 237 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 TMCO1Q9UM00 188 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 L3MBTL1Q9Y468 752 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 MAP2K7O14733 419 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 SLC7A4O43246 635 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 KLHL2O95198 593 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 GUCA1CO95843 209 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 SERPINE1P05121 402 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 ATP6V0D1P61421 351 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 ZNF252P-AS1Q0IIN9 211 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 DPYSQ14117 519 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 MYLK3Q32MK0 819 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 INO80DQ53TQ3 878 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-204ENST00000397606 VITQ6UXI7 678 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 CAMK1DQ8IU85 385 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 SLC41A1Q8IVJ1 513 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 CYB5D2Q8WUJ1 264 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 ATL1Q8WXF7 558 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 PHF21BQ96EK2 531 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 MFSD3Q96ES6 412 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 PPP1R36Q96LQ0 422 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 ASB2Q96Q27 587 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 EFHD1Q9BUP0 239 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 TTLL2Q9BWV7 592 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 MIR1-1HGQ9H1L0 117 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 MRPL46Q9H2W6 279 aaKnown RBP8.3□□□□□ -1.08
PTPRD-204ENST00000397606 BAIAP2L1Q9UHR4 511 aa8.3□□□□□ -1.08
PTPRD-204ENST00000397606 VPS51Q9UID3 782 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms