RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 GLDCP23378 1020 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 HLA-FP30511 346 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 CSKP41240 450 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 MAGEA4P43358 317 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 SOX9P48436 509 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 SARNPP82979 210 aaKnown RBP11.54□□□□□ -0.56
RTN1-203ENST00000395090 ARF5P84085 180 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 FCHO2Q0JRZ9 810 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 LMAN2Q12907 356 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 PRPSAP1Q14558 356 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 DHCR24Q15392 516 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 TANGO2Q6ICL3 276 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 LRRC8BQ6P9F7 803 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 ZNF354CQ86Y25 554 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 CCDC117Q8IWD4 279 aaPredicted RBP11.54□□□□□ -0.56
RTN1-203ENST00000395090 MFSD6LQ8IWD5 586 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 PGBD5Q8N414 524 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 DCAF4L2Q8NA75 395 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 ARRDC2Q8TBH0 407 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 USP33Q8TEY7 942 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 SUSD6Q92537 303 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 IMP4Q96G21 291 aaKnown RBP11.54□□□□□ -0.56
RTN1-203ENST00000395090 OXNAD1Q96HP4 312 aaPredicted RBP11.54□□□□□ -0.56
RTN1-203ENST00000395090 NECTIN4Q96NY8 510 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 PSKH2Q96QS6 385 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 BBS2Q9BXC9 721 aa11.54□□□□□ -0.56
RTN1-203ENST00000395090 XAB2Q9HCS7 855 aaKnown RBP11.54□□□□□ -0.56
RTN1-203ENST00000395090 UBA2Q9UBT2 640 aaPredicted RBP11.54□□□□□ -0.56
RTN1-203ENST00000395090 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 CBX4O00257 560 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 HOXC11O43248 304 aaPredicted RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 RIPK2O43353 540 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 ANXA9O76027 345 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 TYRP14679 529 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 CD70P32970 193 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 GRIA1P42261 906 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 SLC20A2Q08357 652 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 NSUN2Q08J23 767 aaKnown RBP eCLIP11.53□□□□□ -0.56
RTN1-203ENST00000395090 IHHQ14623 411 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 CYTH1Q15438 398 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 PLEKHG6Q3KR16 790 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 SYCP2LQ5T4T6 812 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 PRPF39Q86UA1 669 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 CCDC25Q86WR0 208 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.53□□□□□ -0.56
RTN1-203ENST00000395090 ELSPBP1Q96BH3 223 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 LRRC39Q96DD0 335 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 MGME1Q9BQP7 344 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 POMKQ9H5K3 350 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 NT5MQ9NPB1 228 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 VPS45Q9NRW7 570 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 THG1LQ9NWX6 298 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 VPS51Q9UID3 782 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 VPS28Q9UK41 221 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 INTS6Q9UL03 887 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 NFS1Q9Y697 457 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 TEX264Q9Y6I9 313 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 DOCK8Q8NF50 2099 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 GOLGA6CA6NDK9 693 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 GOLGA6BA6NDN3 693 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 NEDD8-MDP1E9PL57 170 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 MUSKO15146 869 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 SNAP91O60641 907 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 AVILO75366 819 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 CYP17A1P05093 508 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 MMP2P08253 660 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 NUDT17P0C025 328 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 GOLGA6DP0CG33 693 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 ADRA1AP35348 466 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 GEMIN4P57678 1058 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 ID3Q02535 119 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 NIPAL4Q0D2K0 466 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 PDIA2Q13087 525 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 DMC1Q14565 340 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 PDGFRLQ15198 375 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 SLC14A2Q15849 920 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 KYNUQ16719 465 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 RETSATQ6NUM9 610 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 VITQ6UXI7 678 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 RANBP10Q6VN20 620 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 LEKR1Q6ZMV7 388 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 LINC00523Q86TU6 105 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 ALYREFQ86V81 257 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 AGGF1Q8N302 714 aaeCLIP11.53□□□□□ -0.56
RTN1-203ENST00000395090 SPATA22Q8NHS9 363 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 ASIC4Q96FT7 647 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 SIGLEC10Q96LC7 697 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 LRRC40Q9H9A6 602 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 SAYSD1Q9NPB0 183 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 CASS4Q9NQ75 786 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 ABCB8Q9NUT2 735 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 DNAJC17Q9NVM6 304 aaKnown RBP11.53□□□□□ -0.56
RTN1-203ENST00000395090 HAUS2Q9NVX0 235 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 GOLGA6AQ9NYA3 693 aa11.53□□□□□ -0.56
RTN1-203ENST00000395090 SDR42E2A6NKP2 422 aa11.52□□□□□ -0.57
RTN1-203ENST00000395090 F5H423 210 aaPredicted RBP11.52□□□□□ -0.57
RTN1-203ENST00000395090 AP3B1O00203 1094 aa11.52□□□□□ -0.57
RTN1-203ENST00000395090 NEBLO76041 1014 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms