RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 NFKBIZQ9BYH8 718 aa16.2■□□□□ 0.18
PCDH1-203ENST00000394536 A0A0G2JLL6 359 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CCDC154A6NI56 674 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 GABBR2O75899 941 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 AXLP30530 894 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CLCN5P51795 746 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CHRNB3Q05901 458 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CYS1Q717R9 158 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 PRRT2Q7Z6L0 340 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 RALGPS2Q86X27 583 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CCDC117Q8IWD4 279 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CDYL2Q8N8U2 506 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 STYXQ8WUJ0 223 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 SMOQ99835 787 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 DGCR6LQ9BY27 220 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 ZMYM5Q9UJ78 669 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 TRMT6Q9UJA5 497 aaKnown RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 MEIS3P2A8K0S8 358 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 BCAS2O75934 225 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 ITGBL1O95965 494 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 PRKCGP05129 697 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 PPIL2Q13356 520 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 POLD3Q15054 466 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 IQSEC1Q6DN90 963 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 ANGPTL8Q6UXH0 198 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 C16orf70Q9BSU1 422 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 C9orf16Q9BUW7 83 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 PLAC1Q9HBJ0 212 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CHCHD3Q9NX63 227 aaKnown RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 A8MT66 165 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 MYO1GB0I1T2 1018 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 UBXN8O00124 270 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 FZD9O00144 591 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 STX7O15400 261 aaKnown RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 SH3BP5O60239 455 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 H6PDO95479 791 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 MTHFD1P11586 935 aaKnown RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 YAP1P46937 504 aaKnown RBP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CPT1AP50416 773 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 LSAMPQ13449 338 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 PTPRCAPQ14761 206 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 PGM2L1Q6PCE3 622 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 GPR142Q7Z601 462 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 FBXO32Q969P5 355 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDH1-203ENST00000394536 HGH1Q9BTY7 390 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 CDH9Q9ULB4 789 aa16.19■□□□□ 0.18
PCDH1-203ENST00000394536 TNPO2O14787 897 aaKnown RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 GRID2O43424 1007 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 CD1EP15812 388 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 CD68P34810 354 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 GTF2H3Q13889 308 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 ACBD5Q5T8D3 534 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 PARP8Q8N3A8 854 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 OR2T34Q8NGX1 318 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 OR2T3Q8NH03 318 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 METTL6Q8TCB7 284 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 FAM162AQ96A26 154 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 SLC9A7Q96T83 725 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 CRTAC1Q9NQ79 661 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 TMCO1Q9UM00 188 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 FADS3Q9Y5Q0 445 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 DCLK1O15075 740 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 PGK1P00558 417 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 HLA-DQB2P05538 268 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 LPIN1Q14693 890 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 AHI1Q8N157 1196 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 FBXO30Q8TB52 745 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 PPP1R2P1Q96PQ5 205 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 ACOX2Q99424 681 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 ABCC13Q9NSE7 274 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 FAM105AQ9NUU6 356 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 RIC8BQ9NVN3 520 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 UBAP1Q9NZ09 502 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 KCTD3Q9Y597 815 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 SDHDO14521 159 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 ASLP04424 464 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 IRF1P10914 325 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 RPL10P27635 214 aaKnown RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 MAGEA3P43357 314 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 CDKL1Q00532 357 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 GPR162Q16538 588 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 ZNF423Q2M1K9 1284 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 OGFRL1Q5TC84 451 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 CHST15Q7LFX5 561 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 CIR1Q86X95 450 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 TMEM86AQ8N2M4 240 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 ASB9Q96DX5 294 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 ZNF512Q96ME7 567 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-203ENST00000394536 BPIFA1Q9NP55 256 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 PKP3Q9Y446 797 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 PTGDR2Q9Y5Y4 395 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 SLC30A1Q9Y6M5 507 aa16.18■□□□□ 0.18
PCDH1-203ENST00000394536 SERPINF2P08697 491 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 TAF1CQ15572 869 aaPredicted RBP16.17■□□□□ 0.18
PCDH1-203ENST00000394536 PSMD5Q16401 504 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 NOL9Q5SY16 702 aaKnown RBP16.17■□□□□ 0.18
PCDH1-203ENST00000394536 PTRHD1Q6GMV3 140 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms