RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 KLQ9UEF7 1012 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 GPR34Q9UPC5 381 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 COQ6Q9Y2Z9 468 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 PALMO75781 387 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 GLB1P16278 677 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 HCAR3P49019 387 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 PAPOLAP51003 745 aaKnown RBP17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 OGDHQ02218 1023 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 CLN3Q13286 438 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 MAMLD1Q13495 774 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 ERMARDQ5T6L9 678 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 PLEKHA7Q6IQ23 1121 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 IRF2BP2Q7Z5L9 587 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 SRLQ86TD4 932 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 ZSWIM9Q86XI8 627 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 CAMK1DQ8IU85 385 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 CCDC74AQ96AQ1 378 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 SLC39A8Q9C0K1 460 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 KCTD5Q9NXV2 234 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 RABGEF1Q9UJ41 708 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 ATXN7L1Q9ULK2 861 aaPredicted RBP17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 AP4E1Q9UPM8 1137 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 OR1A2Q9Y585 309 aa17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 FLNBO75369 2602 aaKnown RBP17.59■□□□□ 0.41
SNRPA1-202ENST00000394082 A0A1W2PQ67 120 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 CACNB4O00305 520 aaPredicted RBP17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 ATP1A3P13637 1013 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 INHBCP55103 352 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 IL10RBQ08334 325 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 RALGDSQ12967 914 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 KIF26BQ2KJY2 2108 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 TMCO4Q5TGY1 634 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 XKR5Q6UX68 686 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 LIPIQ6XZB0 460 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 CCDC81Q6ZN84 652 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 RAB11FIP2Q7L804 512 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 FBXO39Q8N4B4 442 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 LZTR1Q8N653 840 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 OR56A4Q8NGH8 313 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 PSKH2Q96QS6 385 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 CCNL2Q96S94 520 aaPredicted RBP17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 LRRN3Q9H3W5 708 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 TENM4Q6N022 2769 aa17.58■□□□□ 0.4
SNRPA1-202ENST00000394082 A0A1W2PQM1 296 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 PMS2P1A4D2B8 440 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 PDE2AO00408 941 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 EEF2KO00418 725 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 TRAFD1O14545 582 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 NVLO15381 856 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 RECQL5O94762 991 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 PCCBP05166 539 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 UGT1A5P35504 534 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 RGRP47804 291 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 RENBPP51606 427 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 AP1S1P61966 158 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 CCL7P80098 99 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 ZFP36L1Q07352 338 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 BCL2L1Q07817 233 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 TSR1Q2NL82 804 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 CERCAMQ5T4B2 595 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 SASS6Q6UVJ0 657 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 RFX8Q6ZV50 586 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 DPPA4Q7L190 304 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 RD3Q7Z3Z2 195 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 B3GNT8Q7Z7M8 397 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 ARHGAP12Q8IWW6 846 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 FUBP1Q96AE4 644 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 MED8Q96G25 268 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 PDXPQ96GD0 296 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 CELF6Q96J87 481 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 ZNF599Q96NL3 588 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 CINPQ9BW66 212 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 B3GNT4Q9C0J1 378 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 DHX35Q9H5Z1 703 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 SIRPGQ9P1W8 387 aa17.57■□□□□ 0.4
SNRPA1-202ENST00000394082 TMEM191CA6NGB0 347 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 J3QKU1 62 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 CASC3O15234 703 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 NUDT21O43809 227 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 RNF8O76064 485 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 RPLP0P05388 317 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 ELFN1P0C7U0 828 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 GZMAP12544 262 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 ERCC2P18074 760 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 CDK11BP21127 795 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 PSMA2P25787 234 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 NCAPHQ15003 741 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 STX1AQ16623 288 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 FOXR1Q6PIV2 292 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 ARFGAP1Q8N6T3 406 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 PLA2G15Q8NCC3 412 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 OR1E3Q8WZA6 343 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 SNRNP25Q9BV90 132 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 HSD3B7Q9H2F3 369 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 SP110Q9HB58 689 aa17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-202ENST00000394082 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 TMEM202A6NGA9 273 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 B8ZZF3 427 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms