RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 EVA1BQ9NVM1 165 aa18.84■□□□□ 0.61
SNCB-202ENST00000393693 PPARGC1AQ9UBK2 798 aaKnown RBP18.84■□□□□ 0.61
SNCB-202ENST00000393693 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNCB-202ENST00000393693 CSNK1G3Q9Y6M4 447 aa18.84■□□□□ 0.61
SNCB-202ENST00000393693 TCRBV5S1A1TA0A578 114 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 CTAGE15A4D2H0 777 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 EME2A4GXA9 379 aaPredicted RBP18.83■□□□□ 0.6
SNCB-202ENST00000393693 FAM72CH0Y354 149 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 NEMP1O14524 444 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 TSPAN6O43657 245 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 GCATO75600 419 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 CTAGE8P0CG41 777 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 CTNNA2P26232 953 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 PFN3P60673 137 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 LRRC73Q5JTD7 316 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 PPP1R15BQ5SWA1 713 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 FAM72AQ5TYM5 149 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 FAM72DQ6L9T8 149 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 CTAGE6Q86UF2 777 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 FAM72BQ86X60 149 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 CTAGE4Q8IX94 777 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 MCEEQ96PE7 176 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 IL12RB2Q99665 862 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 SEMA4CQ9C0C4 833 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 METTL5Q9NRN9 209 aaKnown RBP18.83■□□□□ 0.6
SNCB-202ENST00000393693 PACSIN2Q9UNF0 486 aaPredicted RBP18.83■□□□□ 0.6
SNCB-202ENST00000393693 ENTPD2Q9Y5L3 495 aa18.83■□□□□ 0.6
SNCB-202ENST00000393693 KRIT1O00522 736 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 MUSKO15146 869 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 LZTS3O60299 673 aaPredicted RBP18.82■□□□□ 0.6
SNCB-202ENST00000393693 UGT2B4P06133 528 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 ITIH2P19823 946 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 CDO1Q16878 200 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 C15orf59Q2T9L4 293 aaPredicted RBP18.82■□□□□ 0.6
SNCB-202ENST00000393693 ZNF805Q5CZA5 627 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 ATXN7L2Q5T6C5 722 aaPredicted RBP18.82■□□□□ 0.6
SNCB-202ENST00000393693 RWDD4Q6NW29 188 aaKnown RBP18.82■□□□□ 0.6
SNCB-202ENST00000393693 FOXR1Q6PIV2 292 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 NLRP14Q86W24 1093 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 NETO2Q8NC67 525 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 FNIP1Q8TF40 1166 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 ARHGEF2Q92974 986 aaKnown RBP18.82■□□□□ 0.6
SNCB-202ENST00000393693 ISG20Q96AZ6 181 aaKnown RBP18.82■□□□□ 0.6
SNCB-202ENST00000393693 PRR11Q96HE9 360 aaPredicted RBP18.82■□□□□ 0.6
SNCB-202ENST00000393693 BTBD6Q96KE9 485 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 CAPZA3Q96KX2 299 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 KLHL32Q96NJ5 620 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 THSD1Q9NS62 852 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 OR12D3Q9UGF7 316 aa18.82■□□□□ 0.6
SNCB-202ENST00000393693 ZNF462Q96JM2 2506 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 ATMQ13315 3056 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 DOCK4Q8N1I0 1966 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 GJB6O95452 261 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 RBMS1P29558 406 aaKnown RBP18.81■□□□□ 0.6
SNCB-202ENST00000393693 ADRA1BP35368 520 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 IGFALSP35858 605 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 UCNP55089 124 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 RHDQ02161 417 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 LY6DQ14210 128 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 NR0B2Q15466 257 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 PRRT3Q5FWE3 981 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 MANEALQ5VSG8 457 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 PLPP6Q8IY26 295 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 SLC35F3Q8IY50 421 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 OR2AP1Q8NGE2 309 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 ASB12Q8WXK4 309 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 RAB7BQ96AH8 199 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 CENPTQ96BT3 561 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 SLC46A1Q96NT5 459 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 NCAPGQ9BPX3 1015 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 BOCQ9BWV1 1114 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 DPH1Q9BZG8 443 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 CARD9Q9H257 536 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 TMEM51Q9NW97 253 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 SPASTQ9UBP0 616 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 APOBEC3BQ9UH17 382 aaKnown RBP18.81■□□□□ 0.6
SNCB-202ENST00000393693 PCDHA3Q9Y5H8 950 aa18.81■□□□□ 0.6
SNCB-202ENST00000393693 COL27A1Q8IZC6 1860 aaPredicted RBP18.81■□□□□ 0.6
SNCB-202ENST00000393693 EFCAB8A8MWE9 144 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 TPP1O14773 563 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 DDX3YO15523 660 aaKnown RBP18.8■□□□□ 0.6
SNCB-202ENST00000393693 MMP20O60882 483 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 GSRP00390 522 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 RHOQP17081 205 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 PSMA2P25787 234 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 CXCR5P32302 372 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 CTNNA1P35221 906 aaKnown RBP18.8■□□□□ 0.6
SNCB-202ENST00000393693 RWDD2BP57060 319 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 RPL7AP62424 266 aaKnown RBP18.8■□□□□ 0.6
SNCB-202ENST00000393693 MYLK3Q32MK0 819 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 CCDC14Q49A88 953 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 RBM44Q6ZP01 1051 aaKnown RBP18.8■□□□□ 0.6
SNCB-202ENST00000393693 CREG2Q8IUH2 290 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 RHOT1Q8IXI2 618 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 PHACTR4Q8IZ21 702 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 NIPA2Q8N8Q9 360 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 DENND6BQ8NEG7 585 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 JOSD2Q8TAC2 188 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 COG1Q8WTW3 980 aa18.8■□□□□ 0.6
SNCB-202ENST00000393693 BTN2A2Q8WVV5 523 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms