RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 MFSD5Q6N075 450 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 SMYD1Q8NB12 490 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 RASSF5Q8WWW0 418 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 RHOBTB2Q9BYZ6 727 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 SNX6Q9UNH7 406 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 GRIN2DO15399 1336 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 FRMPD4Q14CM0 1322 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 ZNF432O94892 652 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 SERPINF2P08697 491 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 IDH3AP50213 366 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 COLEC12Q5KU26 742 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 ANO7Q6IWH7 933 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 PGAM4Q8N0Y7 254 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 OR52E6Q96RD3 313 aa16.21■□□□□ 0.19
SHANK1-204ENST00000391814 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
SHANK1-204ENST00000391814 FGFR1P11362 822 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 PPP3CAQ08209 521 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 PAN2Q504Q3 1202 aaKnown RBP16.21■□□□□ 0.18
SHANK1-204ENST00000391814 GLYATQ6IB77 296 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 PHACTR4Q8IZ21 702 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 HM13Q8TCT9 377 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 FCRL4Q96PJ5 515 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 EMILIN2Q9BXX0 1053 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 SETBP1Q9Y6X0 1596 aa16.21■□□□□ 0.18
SHANK1-204ENST00000391814 PGRMC2O15173 223 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 SUZ12Q15022 739 aaKnown RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 SWI5Q1ZZU3 235 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 GPRIN3Q6ZVF9 776 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 CUZD1Q86UP6 607 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 EHD1Q9H4M9 534 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 SNTG2Q9NY99 539 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 PCDHGA4Q9Y5G9 962 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ASTN1O14525 1302 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ANGPTL1O95841 491 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 OR56A5P0C7T3 313 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 HOXD10P28358 340 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 CTSKP43235 329 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 PRKAG1P54619 331 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ZC3H12AQ5D1E8 599 aaKnown RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ACSBG2Q5FVE4 666 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 SLC4A11Q8NBS3 891 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 C11orf24Q96F05 449 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 C1QTNF1Q9BXJ1 281 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 TKTL2Q9H0I9 626 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 NEO1Q92859 1461 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ASLP04424 464 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 FMO1Q01740 532 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 STXBP5Q5T5C0 1151 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 NEPROQ6NW34 567 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 USP43Q70EL4 1123 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 S100A13Q99584 98 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 OR6C70A6NIJ9 312 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 SIGLEC16A6NMB1 481 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 PAPSS1O43252 624 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 NCK1P16333 377 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 OR1E1P30953 314 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 CD83Q01151 205 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ATP13A5Q4VNC0 1218 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 TLCD1Q96CP7 247 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 PNPLA8Q9NP80 782 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 ZNF99A8MXY4 864 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 AZIN1O14977 448 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 BUD23O43709 281 aaKnown RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 KLRC4O43908 158 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 CD86P42081 329 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 HNMTP50135 292 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 SLC22A16Q86VW1 577 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 PPP3R2Q96LZ3 170 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 OSGEPL1Q9H4B0 414 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 KLF15Q9UIH9 416 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 CNOT6Q9ULM6 557 aaKnown RBP16.2■□□□□ 0.18
SHANK1-204ENST00000391814 PCDHB7Q9Y5E2 793 aa16.2■□□□□ 0.18
SHANK1-204ENST00000391814 H3BSA7 217 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 GNB5O14775 395 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 CCNDBP1O95273 360 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 NUDT14O95848 222 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 MAPK9P45984 424 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 GPR1P46091 355 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 CTBP1Q13363 440 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 DLG2Q15700 870 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 FNDC11Q9BVV2 318 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 TNPO3Q9Y5L0 923 aaKnown RBP16.19■□□□□ 0.18
SHANK1-204ENST00000391814 A0A0X1KG70 313 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ANKDD1BA6NHY2 528 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 NOBOXO60393 691 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 PDHA2P29803 388 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 VBP1P61758 197 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 FASTKD3Q14CZ7 662 aaKnown RBP16.19■□□□□ 0.18
SHANK1-204ENST00000391814 C4orf19Q8IY42 314 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 FAM156AQ8NDB6 213 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ERMAPQ96PL5 475 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-204ENST00000391814 FAM129BQ96TA1 746 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 PEX16Q9Y5Y5 336 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 SCGNO76038 276 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms