RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 GPT2Q8TD30 523 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 POF1BQ8WVV4 589 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 RAB40AQ8WXH6 277 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CCT6BQ92526 530 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 FBXL8Q96CD0 374 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 RNFT2Q96EX2 444 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 SH3GL2Q99962 352 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 LRRC1Q9BTT6 524 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 TRMT61BQ9BVS5 477 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 UPF2Q9HAU5 1272 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 PCDH9Q9HC56 1237 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 SDF2L1Q9HCN8 221 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 BPIFA1Q9NP55 256 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 RASSF1Q9NS23 344 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 MCM9Q9NXL9 1143 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 MAP3K20Q9NYL2 800 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CISD1Q9NZ45 108 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 FNIP2Q9P278 1114 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 HDAC6Q9UBN7 1215 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC9A2Q9UBY0 812 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 RCOR1Q9UKL0 485 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 FAF1Q9UNN5 650 aaPredicted RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 GAB2Q9UQC2 676 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 MMP24Q9Y5R2 645 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CGNL1Q0VF96 1302 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 IGKV3D-20A0A0C4DH25 116 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 CPED1A4D0V7 1026 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 KLRF2D3W0D1 207 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 STX16-NPEPL1H3BU86 382 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SOCS6O14544 535 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 STX16O14662 325 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 PER2O15055 1255 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 CLIC2O15247 247 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 PCDH7O60245 1069 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 LDLRP01130 860 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 MMP2P08253 660 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 HMGB1P09429 215 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 KRT5P13647 590 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SRD5A1P18405 259 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 CHKAP35790 457 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 PIGAP37287 484 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 GLIPR1P48060 266 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 CRIP2P52943 208 aaPredicted RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 PNLIPRP1P54315 467 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 PRKAA2P54646 552 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 DRG2P55039 364 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 PDE1BQ01064 536 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 GALNT1Q10472 559 aaPredicted RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SREBF2Q12772 1141 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF155Q12901 538 aaPredicted RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 CUL4BQ13620 913 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TRIM14Q14142 442 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 PPP2R5BQ15173 497 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 HIST2H2ACQ16777 129 aaPredicted RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SOWAHAQ2M3V2 549 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TCTN1Q2MV58 587 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM35AQ53FP2 167 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 KCNT1Q5JUK3 1230 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SH2D4BQ5SQS7 431 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 FAM69BQ5VUD6 431 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 NAA35Q5VZE5 725 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 RGMBQ6NW40 437 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 METTL2BQ6P1Q9 378 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 MEX3BQ6ZN04 569 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TAOK1Q7L7X3 1001 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 ADGRG6Q86SQ4 1221 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TADA2BQ86TJ2 420 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC9B2Q86UD5 537 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 FAM160B2Q86V87 743 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 C2CD5Q86YS7 1000 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 FTSJ3Q8IY81 847 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 KIAA2013Q8IYS2 634 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 ZCCHC9Q8N567 271 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF485Q8NCK3 441 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 C11orf65Q8NCR3 313 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 VPS37AQ8NEZ2 397 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 BEST2Q8NFU1 509 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 HCAR2Q8TDS4 363 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 DNAAF4Q8WXU2 420 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 STAMBPL1Q96FJ0 436 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 METTL2AQ96IZ6 378 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TTC14Q96N46 770 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF583Q96ND8 569 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 BBS4Q96RK4 519 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 NEURL2Q9BR09 285 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 MXRA8Q9BRK3 442 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 RBM4Q9BWF3 364 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TWSG1Q9GZX9 223 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC32A1Q9H598 525 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 EPHX3Q9H6B9 360 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 FBRSL1Q9HCM7 1045 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 CNGB3Q9NQW8 809 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM160Q9NX00 188 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 SRP68Q9UHB9 627 aaKnown RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 TTC7AQ9ULT0 858 aaPredicted RBP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 ERVK-11Q9UQG0 969 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 FAM96BQ9Y3D0 163 aa1.32□□□□□ -2.2
SNORD28B-201ENST00000390993 LOXL2Q9Y4K0 774 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms