RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SLC9A1P19634 815 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KLRC1P26715 233 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 NDUFS1P28331 727 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DUSP1P28562 367 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 EPHA3P29320 983 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LRPAP1P30533 357 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 OXTRP30559 389 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 HTR1FP30939 366 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MCM5P33992 734 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GALNSP34059 522 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 APLNRP35414 380 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GNL1P36915 607 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MMP12P39900 470 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CAPGP40121 348 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 VIPR2P41587 438 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 STAT1P42224 750 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 IER3P46695 156 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC6A9P48067 706 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SOX9P48436 509 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PPP3CCP48454 512 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 NR2C2P49116 596 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PRKAG1P54619 331 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC12A3P55017 1021 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MANFP55145 182 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM50BP56557 158 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 WNT3P56703 355 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TMPRSS3P57727 454 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ERVPABLB-1P60509 514 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PSMC1P62191 440 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 EEF1A1P68104 462 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RPL24P83731 157 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 VLDLRP98155 873 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DMWDQ09019 674 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MGAT2Q10469 447 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CALCOCO2Q13137 446 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CCNIQ14094 377 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SERTAD2Q14140 314 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KIAA0141Q14154 515 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MYBPC2Q14324 1141 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GALNT3Q14435 633 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 IQCB1Q15051 598 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CNN3Q15417 329 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TEAD2Q15562 447 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MPPED2Q15777 294 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PTPN21Q16825 1174 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LY6KQ17RY6 165 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 HLA-BQ31612 363 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MOGAT2Q3SYC2 334 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MGAT5BQ3V5L5 792 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RABL6Q3YEC7 729 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SYTL3Q4VX76 610 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CCDC93Q567U6 631 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 VWA2Q5GFL6 755 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MUM1L1Q5H9M0 696 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TOR1AIP1Q5JTV8 583 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM182AQ5T1J6 154 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 EEF1A1P5Q5VTE0 462 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ALS2CLQ60I27 953 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM71E1Q6IPT2 247 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TRNP1Q6NT89 227 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CCDC144NLQ6NUI1 221 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 FIP1L1Q6UN15 594 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PAMR1Q6UXH9 720 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GADL1Q6ZQY3 521 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CCDC129Q6ZRS4 1044 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MFSD6Q6ZSS7 791 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CDHR3Q6ZTQ4 885 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 HS2ST1Q7LGA3 356 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DDX53Q86TM3 631 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF354CQ86Y25 554 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PASD1Q8IV76 773 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 BRSK2Q8IWQ3 736 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LRRC47Q8N1G4 583 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MTURNQ8N3F0 131 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PRSS35Q8N3Z0 413 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF525Q8N782 197 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 HORMAD2Q8N7B1 307 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF433Q8N7K0 673 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 IGSF22Q8N9C0 903 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LRRC57Q8N9N7 239 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LINC01555Q8NAE3 123 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KIAA0895Q8NCT3 520 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 OR52N4Q8NGI2 321 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DDX55Q8NHQ9 600 aaKnown RBP eCLIP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF519Q8TB69 540 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 BRIX1Q8TDN6 353 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZFAND2BQ8WV99 257 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KBTBD7Q8WVZ9 684 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PCNPQ8WW12 178 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KAT5Q92993 513 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 IL22RA2Q969J5 263 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GJA10Q969M2 543 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 AZIN2Q96A70 460 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SLCO4A1Q96BD0 722 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PDXPQ96GD0 296 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CALML4Q96GE6 196 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RAX2Q96IS3 184 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 VPS50Q96JG6 964 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MAGED4Q96JG8 741 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PRAC1Q96KF2 57 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms