RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TBC1D20Q96BZ9 403 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 ELP4Q96EB1 424 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 EPYCQ99645 322 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 REEP2Q9BRK0 252 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 MXRA8Q9BRK3 442 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 HAUS8Q9BT25 410 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 CSTL1Q9H114 145 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 TTYH1Q9H313 450 aaPredicted RBP3.35□□□□□ -1.87
TRAV40-201ENST00000390467 ESRP2Q9H6T0 727 aaKnown RBP3.35□□□□□ -1.87
TRAV40-201ENST00000390467 NOD2Q9HC29 1040 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 SNTG1Q9NSN8 517 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 PEMTQ9UBM1 199 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 TINAGQ9UJW2 476 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 NFE2L3Q9Y4A8 694 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 GREB1LQ9C091 1923 aaPredicted RBP3.34□□□□□ -1.87
TRAV40-201ENST00000390467 P2RY10O00398 339 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 IRAK2O43187 625 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 RFPL2O75678 378 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 CRYAAP02489 173 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 HLA-DOBP13765 273 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 KCNA5P22460 613 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 MARK3P27448 753 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 CHATP28329 748 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 EIF2S3P41091 472 aaKnown RBP3.34□□□□□ -1.87
TRAV40-201ENST00000390467 YWHAZP63104 245 aaKnown RBP3.34□□□□□ -1.87
TRAV40-201ENST00000390467 RELQ04864 619 aaPredicted RBP3.34□□□□□ -1.87
TRAV40-201ENST00000390467 GRIK3Q13003 919 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 ANKRD45Q5TZF3 282 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 FBXL22Q6P050 247 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 GDPD4Q6W3E5 623 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 MTSS1LQ765P7 747 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 NOL8Q76FK4 1167 aaKnown RBP3.34□□□□□ -1.87
TRAV40-201ENST00000390467 SFR1Q86XK3 245 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 PLD5Q8N7P1 536 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 RUFY2Q8WXA3 655 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 OTULINQ96BN8 352 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 FEM1CQ96JP0 617 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 TTC14Q96N46 770 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 CD180Q99467 661 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 TAOK3Q9H2K8 898 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 ZFP57Q9NU63 452 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 ALKBH4Q9NXW9 302 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 VDAC3Q9Y277 283 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 PCDHGB3Q9Y5G1 929 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 CGNL1Q0VF96 1302 aa3.34□□□□□ -1.87
TRAV40-201ENST00000390467 TAF1P21675 1872 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 CYC1P08574 325 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 PCNAP12004 261 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 SRCP12931 536 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 PAPOLAP51003 745 aaKnown RBP3.33□□□□□ -1.88
TRAV40-201ENST00000390467 CRIP2P52943 208 aaPredicted RBP3.33□□□□□ -1.88
TRAV40-201ENST00000390467 TDGQ13569 410 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 SLC12A1Q13621 1099 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 FBXO47Q5MNV8 452 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 SERTAD4-AS1Q5TG53 156 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 HIST2H2BCQ6DN03 193 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 HIST2H2BDQ6DRA6 164 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 CCNI2Q6ZMN8 369 aaPredicted RBP3.33□□□□□ -1.88
TRAV40-201ENST00000390467 ADGRG6Q86SQ4 1221 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 GPAT4Q86UL3 456 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 KLHDC8BQ8IXV7 354 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 NKAPQ8N5F7 415 aaKnown RBP3.33□□□□□ -1.88
TRAV40-201ENST00000390467 USP38Q8NB14 1042 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 LRRC8CQ8TDW0 803 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 LBHD1Q9BQE6 289 aaPredicted RBP3.33□□□□□ -1.88
TRAV40-201ENST00000390467 C17orf75Q9HAS0 396 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 CNGB3Q9NQW8 809 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 KLHL1Q9NR64 748 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 SMYD2Q9NRG4 433 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 KIAA1456Q9P272 454 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 CARD8Q9Y2G2 431 aa3.33□□□□□ -1.88
TRAV40-201ENST00000390467 BCAT2O15382 392 aaPredicted RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 ZG16O60844 167 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 SLC22A3O75751 556 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 G6PDP11413 515 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 KRT10P13645 584 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 ETFAP13804 333 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 GPTP24298 496 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 STX2P32856 288 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 ARL4CP56559 192 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 PHEXP78562 749 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 TBL3Q12788 808 aaKnown RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 DMP1Q13316 513 aaPredicted RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 EFR3AQ14156 821 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 EIF2S3LQ2VIR3 472 aaKnown RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 SGO1Q5FBB7 561 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 WDR45BQ5MNZ6 344 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 MAP3K21Q5TCX8 1036 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 PMS2CLQ68D20 193 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 GFRALQ6UXV0 394 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 DSG4Q86SJ6 1040 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 CHERPQ8IWX8 916 aaKnown RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 DHX40Q8IX18 779 aaKnown RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 SLC35F3Q8IY50 421 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 OR2AK2Q8NG84 335 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 BBS10Q8TAM1 723 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 CCT6BQ92526 530 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 USP13Q92995 863 aaPredicted RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 PYM1Q9BRP8 204 aaKnown RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 HEMGNQ9BXL5 484 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms