RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 NOL6Q9H6R4 1146 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 CPNE5Q9HCH3 593 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 FBXO8Q9NRD0 319 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 WARS2Q9UGM6 360 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 NRP2O60462 931 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 GPD1P21695 349 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 HTR1BP28222 390 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 LRPAP1P30533 357 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SQLEQ14534 574 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 CTF1Q16619 201 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SIGIRRQ6IA17 410 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 XRRA1Q6P2D8 792 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SCARA5Q6ZMJ2 495 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 ADGRG5Q8IZF4 528 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SPARTQ8N0X7 666 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 ACVR1CQ8NER5 493 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 TRPV3Q8NET8 790 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 RXFP2Q8WXD0 754 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SGCDQ92629 289 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 MUS81Q96NY9 551 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 MSTO1Q9BUK6 570 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 NEK6Q9HC98 313 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 ZNF229Q9UJW7 825 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 MYO18AQ92614 2054 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 H0Y858 1186 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 DEAF1O75398 565 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 POLBP06746 335 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 ARSAP15289 507 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 UBA1P22314 1058 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 PSMA4P25789 261 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC12A1Q13621 1099 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 CA9Q16790 459 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 PUS10Q3MIT2 529 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 PAGE2BQ5JRK9 111 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 FAM102AQ5T9C2 384 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 BSPRYQ5W0U4 402 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 BTBD8Q5XKL5 378 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 ERO1BQ86YB8 467 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 LRRC49Q8IUZ0 686 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 HACE1Q8IYU2 909 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SCML4Q8N228 414 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 MCPH1Q8NEM0 835 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 CEP295NLQ96MC4 621 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 C17orf80Q9BSJ5 609 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 TASP1Q9H6P5 420 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 TLR9Q9NR96 1032 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 CCDC78A2IDD5 438 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SOWAHBA6NEL2 793 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 H0YAE9 185 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 HOXC11O43248 304 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 ASNA1O43681 348 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SCO2O43819 266 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 TPPPO94811 219 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 PDGFRAP16234 1089 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 OXTRP30559 389 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 POLD3Q15054 466 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 MAPK11Q15759 364 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 CDO1Q16878 200 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 BOLA3Q53S33 107 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 XKR3Q5GH77 459 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 AGMOQ6ZNB7 445 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 RFPL4BQ6ZWI9 263 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC43A3Q8NBI5 491 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 GOLM1Q8NBJ4 401 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 RDM1Q8NG50 284 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SPPL2BQ8TCT7 592 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 AGAP2Q99490 1192 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC25A23Q9BV35 468 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 TRIM15Q9C019 465 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 SP140LQ9H930 580 aa14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 FBXO9Q9UK97 447 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-201ENST00000389386 DNAH12Q6ZR08 3092 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 H0YCG3 227 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 SHMT2P34897 504 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 HSDL1Q3SXM5 330 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 MFSD3Q96ES6 412 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 PGLYRP2Q96PD5 576 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 QKIQ96PU8 341 aaKnown RBP eCLIP14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 PCYT2Q99447 389 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 GMIPQ9P107 970 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 FBXO40Q9UH90 709 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 TESMINQ9Y4I5 508 aa14.71□□□□□ -0.05
VPS9D1-201ENST00000389386 LOC105371267A0A1B0GV96 52 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 FAM172BPA6NC97 362 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 NME4O00746 187 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 SNPHO15079 494 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 MED7O43513 233 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 DYRK3O43781 588 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 XYLBO75191 536 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 RFPL2O75678 378 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 DDHD2O94830 711 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 GJA5P36382 358 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 GTF2A2P52657 109 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 CHRNEQ04844 493 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 ILF2Q12905 390 aaKnown RBP14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 SNX17Q15036 470 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 AASDHQ4L235 1098 aaPredicted RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms