RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 TSPAN11A1L157 253 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 ANTXRLA6NF34 631 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 SHISA7A6NL88 538 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 C2orf81A6NN90 581 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 KPNA3O00505 521 aaPredicted RBP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 KLF8O95600 359 aaPredicted RBP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 PIRTP0C851 137 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 BMP1P13497 986 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 XPAP23025 273 aaPredicted RBP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 FRG1Q14331 258 aaKnown RBP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 STAT4Q14765 748 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 TAF1AQ15573 450 aaPredicted RBP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 GLT6D1Q7Z4J2 308 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 UHMK1Q8TAS1 419 aaKnown RBP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 DYRK4Q9NR20 520 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 NDRG2Q9UN36 371 aaKnown RBP20.53■□□□□ 0.88
TSSC4-203ENST00000380996 FAM169AQ9Y6X4 670 aa20.53■□□□□ 0.88
TSSC4-203ENST00000380996 F5P12259 2224 aa20.52■□□□□ 0.88
TSSC4-203ENST00000380996 MUC22E2RYF6 1773 aaPredicted RBP20.52■□□□□ 0.88
TSSC4-203ENST00000380996 TCRBV9S1A1TA0A576 114 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 MROH6A6NGR9 719 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 RNF40O75150 1001 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 IL1BP01584 269 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 CHRM1P11229 460 aaPredicted RBP20.52■□□□□ 0.87
TSSC4-203ENST00000380996 CTPS1P17812 591 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 CD72P21854 359 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 ABL2P42684 1182 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 UGP2Q16851 508 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 SKIDA1Q1XH10 827 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 UBAP2Q5T6F2 1119 aaKnown RBP20.52■□□□□ 0.87
TSSC4-203ENST00000380996 TSTD2Q5T7W7 516 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 ZSWIM9Q86XI8 627 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 TXNDC5Q8NBS9 432 aaKnown RBP20.52■□□□□ 0.87
TSSC4-203ENST00000380996 FBF1Q8TES7 1133 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 MFSD3Q96ES6 412 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 SCRN2Q96FV2 425 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 LYSMD1Q96S90 227 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 SPO11Q9Y5K1 396 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 UNC80Q8N2C7 3258 aa20.52■□□□□ 0.87
TSSC4-203ENST00000380996 CAPN8A6NHC0 703 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 C16orf96A6NNT2 1141 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 LDB2O43679 373 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 PRKCGP05129 697 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 IVLP07476 585 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 ITGB7P26010 798 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 NMBRP28336 390 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 LRRC32Q14392 662 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 KLHL38Q2WGJ6 581 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 EOGTQ5NDL2 527 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 ZNF449Q6P9G9 518 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 CES3Q6UWW8 571 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 MMAAQ8IVH4 418 aaKnown RBP20.51■□□□□ 0.87
TSSC4-203ENST00000380996 SYNPOQ8N3V7 929 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 STYXQ8WUJ0 223 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 ZIM3Q96PE6 472 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 CYTH2Q99418 400 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 NELL2Q99435 816 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 TRIM56Q9BRZ2 755 aaKnown RBP20.51■□□□□ 0.87
TSSC4-203ENST00000380996 GPR63Q9BZJ6 419 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 PLAC1Q9HBJ0 212 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 ZNF711Q9Y462 761 aa20.51■□□□□ 0.87
TSSC4-203ENST00000380996 ZCWPW2A0A1B0GU75 182 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 UPK3BL1B0FP48 263 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 UPK3BL2E5RIL1 263 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 ALDH1A2O94788 518 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 ALPIP09923 528 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 HOXB2P14652 356 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 LPOP22079 712 aaPredicted RBP20.5■□□□□ 0.87
TSSC4-203ENST00000380996 HNF1BP35680 557 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 SUOXP51687 545 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 CROCCP2Q86T23 111 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 TTC7BQ86TV6 843 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 MDGA1Q8NFP4 955 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 OR2T3Q8NH03 318 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 CDKL2Q92772 493 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 FCRL3Q96P31 734 aaPredicted RBP20.5■□□□□ 0.87
TSSC4-203ENST00000380996 MCCC1Q96RQ3 725 aaPredicted RBP20.5■□□□□ 0.87
TSSC4-203ENST00000380996 RSPH9Q9H1X1 276 aaPredicted RBP20.5■□□□□ 0.87
TSSC4-203ENST00000380996 ACSS3Q9H6R3 686 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 PPCSQ9HAB8 311 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 TREX1Q9NSU2 369 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 MOCS1Q9NZB8 636 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 RABGEF1Q9UJ41 708 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 SARDHQ9UL12 918 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 ARL5AQ9Y689 179 aa20.5■□□□□ 0.87
TSSC4-203ENST00000380996 EXOC1LA0A1B0GW35 172 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 SASH3O75995 380 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 ADH1BP00325 375 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 SHBGP04278 402 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 CYP2A6P11509 494 aaPredicted RBP20.49■□□□□ 0.87
TSSC4-203ENST00000380996 TIMP2P16035 220 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 STARD6P59095 220 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 CNGA3Q16281 694 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 LONRF1Q17RB8 773 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 ZNF776Q68DI1 518 aaPredicted RBP20.49■□□□□ 0.87
TSSC4-203ENST00000380996 ESRP1Q6NXG1 681 aaKnown RBP20.49■□□□□ 0.87
TSSC4-203ENST00000380996 ERAP2Q6P179 960 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 GJD3Q8N144 294 aa20.49■□□□□ 0.87
TSSC4-203ENST00000380996 RPLP0P6Q8NHW5 317 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms