RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 SCOCQ9UIL1 159 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 SPO11Q9Y5K1 396 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 SNX13Q9Y5W8 968 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 CNTRLQ7Z7A1 2325 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ZNF839A8K0R7 811 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 UPK3BL1B0FP48 263 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 UPK3BL2E5RIL1 263 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 CDC7O00311 574 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 ADAMTS4O75173 837 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 CPOXP36551 454 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 VPS26BQ4G0F5 336 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 RAB41Q5JT25 222 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 CUZD1Q86UP6 607 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 DNAJB14Q8TBM8 379 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 ZNF398Q8TD17 642 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 NMD3Q96D46 503 aaKnown RBP12.74□□□□□ -0.37
TTC39B-202ENST00000380850 C3orf30Q96M34 536 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 HACD3Q9P035 362 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 A8MT66 165 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 NCK1P16333 377 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 TSHRP16473 764 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 PAMP19021 973 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 TSNQ15631 228 aaKnown RBP12.74□□□□□ -0.37
TTC39B-202ENST00000380850 OR10Q1Q8NGQ4 319 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 SERPINB11Q96P15 392 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 MRPL46Q9H2W6 279 aaKnown RBP12.74□□□□□ -0.37
TTC39B-202ENST00000380850 RCOR3Q9P2K3 495 aaPredicted RBP12.74□□□□□ -0.37
TTC39B-202ENST00000380850 USP22Q9UPT9 525 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 PCDHB9Q9Y5E1 797 aa12.74□□□□□ -0.37
TTC39B-202ENST00000380850 NPEPPSL1A6NEC2 478 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 BTN3A1O00481 513 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SRP72O76094 671 aaKnown RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 CLIC3O95833 236 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SLC6A4P31645 630 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 RPL9P32969 192 aaKnown RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SP3Q02447 781 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 CEACAM7Q14002 265 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 KRT72Q14CN4 511 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PTPRNQ16849 979 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 TCTN1Q2MV58 587 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 CCDC153Q494R4 210 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 FSCBQ5H9T9 825 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PM20D1Q6GTS8 502 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 FAM171BQ6P995 826 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PAQR3Q6TCH7 311 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 MIER2Q8N344 545 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 BCL7CQ8WUZ0 217 aaPredicted RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PTERQ96BW5 349 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SUSD3Q96L08 255 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 LRGUKQ96M69 825 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 DEFB118Q96PH6 123 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 GPR22Q99680 433 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 FKBPLQ9UIM3 349 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 VWA7Q9Y334 891 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 WDR87Q6ZQQ6 2873 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 H0Y626 953 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 TRIM16O95361 564 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PRAMEF12O95522 483 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 UGT1A1P22309 533 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 UGT1A4P22310 534 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 CNTFP26441 200 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 UGT1A3P35503 534 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 UGT1A5P35504 534 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PSEN1P49768 467 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 ACTR3P61158 418 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 DSG1Q02413 1049 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PTK2BQ14289 1009 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 FASTKQ14296 549 aaKnown RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 RBBP7Q16576 425 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 BNC2Q6ZN30 1099 aaPredicted RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SLC24A5Q71RS6 500 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 DET1Q7L5Y6 550 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 LINC00523Q86TU6 105 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 ZNF366Q8N895 744 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 KYQ8NBH2 561 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SIDT2Q8NBJ9 832 aaKnown RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 CLHC1Q8NHS4 586 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SLC30A3Q99726 388 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 SOX17Q9H6I2 414 aaPredicted RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 S100A14Q9HCY8 104 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 ADAM28Q9UKQ2 775 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 E7ENX8 843 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 F5H5T6 163 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 ZNF195O14628 629 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 PRRG1O14668 218 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 CLGNO14967 610 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 NCAM2O15394 837 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 CKMT2P17540 419 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 EFNA1P20827 205 aaPredicted RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 GDF5P43026 501 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 RENBPP51606 427 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 EPGNQ6UW88 154 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 C4orf22Q6V702 233 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 MON1AQ86VX9 555 aa12.73□□□□□ -0.37
TTC39B-202ENST00000380850 DCP1BQ8IZD4 617 aaKnown RBP12.73□□□□□ -0.37
TTC39B-202ENST00000380850 NSMCE3Q96MG7 304 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms