RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ADSLP30566 484 aaPredicted RBP21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ELF1P32519 619 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 NAGLUP54802 743 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 DUSP4Q13115 394 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 NAA25Q14CX7 972 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 SLC9B1Q4ZJI4 515 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 SIRPB2Q5JXA9 342 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 BBS5Q8N3I7 341 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 CCDC28BQ9BUN5 200 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 NCKIPSDQ9NZQ3 722 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 DNMT3LQ9UJW3 386 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 RIMKLBQ9ULI2 386 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 KIAA1671Q9BY89 1806 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 H3BNC9 293 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 CHRNGP07510 517 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 RPSAP08865 295 aaKnown RBP21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ATXN1LP0C7T5 689 aaKnown RBP21.65■■□□□ 1.06
TRIM54-202ENST00000380075 HOXB8P17481 243 aaPredicted RBP21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ATP5F1P24539 256 aaPredicted RBP21.65■■□□□ 1.06
TRIM54-202ENST00000380075 SLC26A3P40879 764 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ACVR1Q04771 509 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 SLC34A1Q06495 639 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 DLG1Q12959 904 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 GPM6BQ13491 265 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ZNF235Q14590 738 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ALG1LQ6GMV1 187 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 NADSYN1Q6IA69 706 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 KLC3Q6P597 504 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 CNSTQ6PJW8 725 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ACAD11Q709F0 780 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 CILP2Q8IUL8 1156 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 PGBD5Q8N414 524 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 SPPL3Q8TCT6 385 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 KCNV2Q8TDN2 545 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 CNDP1Q96KN2 507 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 ZNF570Q96NI8 536 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 MAGEH1Q9H213 219 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 CCSER2Q9H7U1 834 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 GPAMQ9HCL2 828 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 CARNS1A5YM72 827 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 GRM6O15303 877 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 LUC7L3O95232 432 aaKnown RBP21.64■■□□□ 1.05
TRIM54-202ENST00000380075 MPSTP25325 297 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 VHLP40337 213 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 TUFMP49411 452 aaKnown RBP21.64■■□□□ 1.05
TRIM54-202ENST00000380075 ACTR3P61158 418 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 TAF11Q15544 211 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 ZRSR2Q15696 482 aaKnown RBP21.64■■□□□ 1.05
TRIM54-202ENST00000380075 KLHDC10Q6PID8 442 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 TAS1R1Q7RTX1 841 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 GDPD5Q8WTR4 605 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 IFT43Q96FT9 208 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 PDFQ9HBH1 243 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 SLC7A8Q9UHI5 535 aa21.64■■□□□ 1.05
TRIM54-202ENST00000380075 CORO1CQ9ULV4 474 aaPredicted RBP21.64■■□□□ 1.05
TRIM54-202ENST00000380075 TMEM265A0A087WTH1 108 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 ACSL4O60488 711 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 KRT36O76013 467 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 CSPG5O95196 566 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 EFEMP2O95967 443 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 RBP1P09455 135 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 LTA4HP09960 611 aaKnown RBP21.63■■□□□ 1.05
TRIM54-202ENST00000380075 TFEBP19484 476 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 ATP5C1P36542 298 aaKnown RBP21.63■■□□□ 1.05
TRIM54-202ENST00000380075 PRAMEP78395 509 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 ZNF460Q14592 562 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 GRIN2CQ14957 1233 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 ZNF697Q5TEC3 545 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 SLC8B1Q6J4K2 584 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 MAPK15Q8TD08 544 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 HEXDCQ8WVB3 486 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 SEMA3CQ99985 751 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 IGSF5Q9NSI5 407 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 TRANK1O15050 2925 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 GREB1Q4ZG55 1949 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 DCXO43602 365 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 SLC11A2P49281 568 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 KLF10Q13118 480 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 TECRLQ5HYJ1 363 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 DDX53Q86TM3 631 aaKnown RBP21.63■■□□□ 1.05
TRIM54-202ENST00000380075 SETD3Q86TU7 594 aaPredicted RBP21.63■■□□□ 1.05
TRIM54-202ENST00000380075 KIRREL3Q8IZU9 778 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 LGI2Q8N0V4 545 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 MAB21L3Q8N8X9 362 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 ACTRT2Q8TDY3 377 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 POF1BQ8WVV4 589 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 N4BP2L2Q92802 583 aaPredicted RBP21.63■■□□□ 1.05
TRIM54-202ENST00000380075 RTKNQ9BST9 563 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 BATF3Q9NR55 127 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 ANGPTL2Q9UKU9 493 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 ARHGAP26Q9UNA1 814 aa21.63■■□□□ 1.05
TRIM54-202ENST00000380075 MIA3Q5JRA6 1907 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 A0A088AWK7 358 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 E9PBE3 544 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 LDB2O43679 373 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 CCNT2O60583 730 aaKnown RBP21.62■■□□□ 1.05
TRIM54-202ENST00000380075 KLHL41O60662 606 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 ATF6P18850 670 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 ACVRL1P37023 503 aa21.62■■□□□ 1.05
TRIM54-202ENST00000380075 BTKQ06187 659 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms