RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TBC1D3GQ6DHY5 549 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 TBC1D3CQ6IPX1 549 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 CHST15Q7LFX5 561 aaPredicted RBP13.33□□□□□ -0.28
HIPK3-202ENST00000379016 TBC1D3Q8IZP1 549 aaPredicted RBP13.33□□□□□ -0.28
HIPK3-202ENST00000379016 PAFAH2Q99487 392 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 TRIM9Q9C026 710 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 IGSF9BQ9UPX0 1349 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 BDH1Q02338 343 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 DPYSQ14117 519 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 SLC41A1Q8IVJ1 513 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 POC1BQ8TC44 478 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 MCCC1Q96RQ3 725 aaPredicted RBP13.33□□□□□ -0.28
HIPK3-202ENST00000379016 PRDM16Q9HAZ2 1276 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 UPB1Q9UBR1 384 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 MAU2Q9Y6X3 613 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 A0A087WXM4 84 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 PDHBP11177 359 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 ME2P23368 584 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 PTGS2P35354 604 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 SCTRP47872 440 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 LHX1P48742 406 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 SCN1BQ07699 218 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 FOXM1Q08050 763 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF155Q12901 538 aaPredicted RBP13.33□□□□□ -0.28
HIPK3-202ENST00000379016 CUL2Q13617 745 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 RETSATQ6NUM9 610 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF554Q86TJ5 538 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 PRSS58Q8IYP2 241 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 WDR24Q96S15 920 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 PHB2Q99623 299 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 MGME1Q9BQP7 344 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 GLS2Q9UI32 602 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 NR2E1Q9Y466 385 aa13.33□□□□□ -0.28
HIPK3-202ENST00000379016 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PRAMEF33A0A0G2JMD5 474 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 H3BSH0 61 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PRAMEF10O60809 474 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ITGA2P17301 1181 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 RRM1P23921 792 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 CNTFP26441 200 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 OC90Q02509 493 aaPredicted RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PIK3C3Q8NEB9 887 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 TBL1YQ9BQ87 522 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PDGFDQ9GZP0 370 aaPredicted RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 COMMD4Q9H0A8 199 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 TRDMT1O14717 391 aaKnown RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PER2O15055 1255 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PGLSO95336 258 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF823P16415 610 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ZCCHC23Q6ZST2 131 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 LRRC20Q8TCA0 184 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 NXPE2Q96DL1 559 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 RRN3Q9NYV6 651 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 SNCAIPQ9Y6H5 919 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 B8ZZF3 427 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 UGT2B17O75795 530 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 CRABP2P29373 138 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 C9orf64Q5T6V5 341 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 RXFP2Q8WXD0 754 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 CPA4Q9UI42 421 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 CYTH4Q9UIA0 394 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 MEMO1Q9Y316 297 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 TPPPO94811 219 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 VAPBO95292 243 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ST3GAL4Q11206 333 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 NAB2Q15742 525 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 STRBPQ96SI9 672 aaKnown RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 IRX2Q9BZI1 471 aaPredicted RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ASB8Q9H765 288 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ADSSP30520 456 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 CD86P42081 329 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ARFRP1Q13795 201 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 FRG1Q14331 258 aaKnown RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 GRM4Q14833 912 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PTGISQ16647 500 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 SPESP1Q6UW49 350 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 FADS2O95864 444 aaKnown RBP13.32□□□□□ -0.28
HIPK3-202ENST00000379016 IFI30P13284 250 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 DGKAP23743 735 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 MFSD10Q14728 455 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 PDK2Q15119 407 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF518AQ6AHZ1 1483 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 TAPBPLQ9BX59 468 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 FBXO44Q9H4M3 255 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 DUOX2Q9NRD8 1548 aa13.32□□□□□ -0.28
HIPK3-202ENST00000379016 FLT1P17948 1338 aa13.31□□□□□ -0.28
HIPK3-202ENST00000379016 A0A087X0B3 334 aa13.31□□□□□ -0.28
HIPK3-202ENST00000379016 M0R129 80 aa13.31□□□□□ -0.28
HIPK3-202ENST00000379016 SGPL1O95470 568 aa13.31□□□□□ -0.28
HIPK3-202ENST00000379016 LIFRP42702 1097 aa13.31□□□□□ -0.28
HIPK3-202ENST00000379016 CTSOP43234 321 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms