RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 CWH43Q9H720 699 aa21.52■■□□□ 1.04
CNTFR-202ENST00000378980 SUDS3Q9H7L9 328 aaPredicted RBP21.52■■□□□ 1.04
CNTFR-202ENST00000378980 UBA2Q9UBT2 640 aaPredicted RBP21.52■■□□□ 1.04
CNTFR-202ENST00000378980 RIMKLBQ9ULI2 386 aa21.52■■□□□ 1.04
CNTFR-202ENST00000378980 CDYLQ9Y232 598 aa21.52■■□□□ 1.04
CNTFR-202ENST00000378980 ANAPC1Q9H1A4 1944 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 LOC100653049A0A140TA62 436 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 CLDN11O75508 207 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 RPP40O75818 363 aaKnown RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 KRT34O76011 436 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 STC2O76061 302 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 UPP2O95045 317 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 NDST3O95803 873 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 GOT2P00505 430 aaKnown RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 KLKB1P03952 638 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 RBP1P09455 135 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 ILF2Q12905 390 aaKnown RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 ACAP2Q15057 778 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 FAM45BPQ6NSW5 357 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 GPR150Q8NGU9 434 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 FAM45AQ8TCE6 357 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 ACTRT2Q8TDY3 377 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 CLSTN3Q9BQT9 956 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 CCDC28BQ9BUN5 200 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 A8MT66 165 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 KDELR3O43731 214 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 GLP2RO95838 553 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 JUNP05412 331 aaKnown RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 ITGAXP20702 1163 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 KCNA5P22460 613 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 CORO1AP31146 461 aaKnown RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 ELF1P32519 619 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 SLC26A3P40879 764 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 OXCT1P55809 520 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 BTKQ06187 659 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 PTPRCAPQ14761 206 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 DEFB128Q7Z7B8 93 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 OR13C4Q8NGS5 318 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 DTX3LQ8TDB6 740 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 N4BP2L2Q92802 583 aaPredicted RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 LBHD1Q9BQE6 289 aaPredicted RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 SPON2Q9BUD6 331 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 CINPQ9BW66 212 aaPredicted RBP21.51■■□□□ 1.03
CNTFR-202ENST00000378980 PPP1R12CQ9BZL4 782 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 SSX2IPQ9Y2D8 614 aa21.51■■□□□ 1.03
CNTFR-202ENST00000378980 COL4A6Q14031 1691 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 ANKRD36A6QL64 1941 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 CCDC162PA2VCL2 907 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 CD3EAPO15446 510 aaKnown RBP21.5■■□□□ 1.03
CNTFR-202ENST00000378980 BUD23O43709 281 aaKnown RBP21.5■■□□□ 1.03
CNTFR-202ENST00000378980 CCNT2O60583 730 aaKnown RBP21.5■■□□□ 1.03
CNTFR-202ENST00000378980 IPO13O94829 963 aaKnown RBP21.5■■□□□ 1.03
CNTFR-202ENST00000378980 PIRTP0C851 137 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 VHLP40337 213 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 SGSHP51688 502 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 PEX6Q13608 980 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 CUL3Q13618 768 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 KIAA1841Q6NSI8 718 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 TMEM207Q6UWW9 146 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 MYLK4Q86YV6 388 aaPredicted RBP21.5■■□□□ 1.03
CNTFR-202ENST00000378980 CPSF7Q8N684 471 aaKnown RBP21.5■■□□□ 1.03
CNTFR-202ENST00000378980 MYRFLQ96LU7 910 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 LENG8Q96PV6 779 aaPredicted RBP21.5■■□□□ 1.03
CNTFR-202ENST00000378980 RTKNQ9BST9 563 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 ZNF385DQ9H6B1 395 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 TRPM5Q9NZQ8 1165 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 ARHGAP26Q9UNA1 814 aa21.5■■□□□ 1.03
CNTFR-202ENST00000378980 ILVBLA1L0T0 632 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 SLC22A2O15244 555 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 PIK3R1P27986 724 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 RGRP47804 291 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 PDCD2Q16342 344 aaPredicted RBP21.49■■□□□ 1.03
CNTFR-202ENST00000378980 MRNIPQ6NTE8 343 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 PGM2L1Q6PCE3 622 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 CHST9Q7L1S5 443 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 SHKBP1Q8TBC3 707 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 NRG4Q8WWG1 115 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 NSMCE3Q96MG7 304 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 CYP4F12Q9HCS2 524 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 PAK6Q9NQU5 681 aaPredicted RBP21.49■■□□□ 1.03
CNTFR-202ENST00000378980 GKN1Q9NS71 199 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 HSFX1Q9UBD0 423 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 CORO1CQ9ULV4 474 aaPredicted RBP21.49■■□□□ 1.03
CNTFR-202ENST00000378980 CRYL1Q9Y2S2 319 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 TMEM233B4DJY2 109 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 ZMPSTE24O75844 475 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 ABLIM3O94929 683 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 PARNO95453 639 aaKnown RBP21.49■■□□□ 1.03
CNTFR-202ENST00000378980 RHOCP08134 193 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 FDXRP22570 491 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 PPARGP37231 505 aaPredicted RBP21.49■■□□□ 1.03
CNTFR-202ENST00000378980 SEMA3AQ14563 771 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 RFTN1Q14699 578 aaPredicted RBP21.49■■□□□ 1.03
CNTFR-202ENST00000378980 SH2D4BQ5SQS7 431 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 ZNF549Q6P9A3 640 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 PIM3Q86V86 326 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 ZNF461Q8TAF7 563 aa21.49■■□□□ 1.03
CNTFR-202ENST00000378980 NAF1Q96HR8 494 aaKnown RBP21.49■■□□□ 1.03
CNTFR-202ENST00000378980 DEFB118Q96PH6 123 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms