RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CCDC162PA2VCL2 907 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PPP6CO00743 305 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 INSIG1O15503 277 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SORBS2O94875 1100 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ALDOAP04075 364 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ABCB1P08183 1280 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CD72P21854 359 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 POU4F1Q01851 419 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 RALGDSQ12967 914 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PPP1R8Q12972 351 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CAPRIN1Q14444 709 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PWP2Q15269 919 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PDK4Q16654 411 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 MRNIPQ6NTE8 343 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 LINC00523Q86TU6 105 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CHPFQ8IZ52 775 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 APCDD1Q8J025 514 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 BEND7Q8N7W2 519 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SIDT2Q8NBJ9 832 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 RUBCNQ92622 972 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 DCUN1D1Q96GG9 259 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 NPAS2Q99743 824 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 DDX50Q9BQ39 737 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TBCDQ9BTW9 1192 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 IL22Q9GZX6 179 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CLPBQ9H078 707 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 FBRSL1Q9HCM7 1045 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 WWOXQ9NZC7 414 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CCL26Q9Y258 94 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 NPEPPSL1A6NEC2 478 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TP73O15350 636 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 HOXA2O43364 376 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TRIM13O60858 407 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SMNDC1O75940 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 KRT36O76013 467 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 RTN3O95197 1032 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 NQO1P15559 274 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ATF6P18850 670 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 RFX3P48380 749 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 NIPAL4Q0D2K0 466 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ACOX1Q15067 660 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TSNQ15631 228 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 LRRC26Q2I0M4 334 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PDPK2PQ6A1A2 396 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TIGD7Q6NT04 549 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ALKAL1Q6UXT8 129 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PRR23CQ6ZRP0 262 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TRAPPC5Q8IUR0 188 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SMG7Q92540 1137 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 RSRC1Q96IZ7 334 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 COQ6Q9Y2Z9 468 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 MYO15AQ9UKN7 3530 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TCRBV5S1A1TA0A578 114 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ANTXRLA6NF34 631 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 MTSS1O43312 755 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 LATO43561 262 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 EDF1O60869 148 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SMIM24O75264 130 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TMCC1O94876 653 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CLDN7O95471 211 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CA3P07451 260 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 EPCAMP16422 314 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ITPKAP23677 461 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 HMOX2P30519 316 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 IRS1P35568 1242 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CTSOP43234 321 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 GABRB2P47870 512 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SERPINB9P50453 376 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TRIP10Q15642 601 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PCID2Q5JVF3 399 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 RARS2Q5T160 578 aaKnown RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SEL1L3Q68CR1 1132 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 FAM180BQ6P0A1 224 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SERPINA13PQ6UXR4 307 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SLC39A5Q6ZMH5 540 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CYP4V2Q6ZWL3 525 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TEX9Q8N6V9 391 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF513Q8N8E2 541 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 FBXO27Q8NI29 283 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 AGAP11Q8TF27 550 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 STK32AQ8WU08 396 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 HEXDCQ8WVB3 486 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 MAGED4Q96JG8 741 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 RAB3IPQ96QF0 476 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 GATA5Q9BWX5 397 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 UBXN6Q9BZV1 441 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 GBA3Q9H227 469 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 TCF7L2Q9NQB0 619 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 DYRK4Q9NR20 520 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 SEPT3Q9UH03 358 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 EGFL7Q9UHF1 273 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 CLEC4EQ9ULY5 219 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 PLLPQ9Y342 182 aa8.14□□□□□ -1.11
CKAP2-203ENST00000378037 FARP1Q9Y4F1 1045 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-203ENST00000378037 C5orf60A6NFR6 353 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 GABRDO14764 452 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 EOMESO95936 686 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 ITGB8P26012 769 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 SLC6A4P31645 630 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 ADAM17P78536 824 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms