RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ZNF148Q9UQR1 794 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 MYO15AQ9UKN7 3530 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 PLXNA2O75051 1894 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 ZFHX2Q9C0A1 2572 aaPredicted RBP13.3□□□□□ -0.28
CKAP2-202ENST00000378034 SDK1Q7Z5N4 2213 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 A0A0J9YYE9 177 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 CTAGE9A4FU28 777 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 ANKRD66B4E2M5 251 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 PGRMC1O00264 195 aaKnown RBP13.3□□□□□ -0.28
CKAP2-202ENST00000378034 TRBC1P01850 177 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 ITIH2P19823 946 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 HNRNPA2B1P22626 353 aaKnown RBP13.3□□□□□ -0.28
CKAP2-202ENST00000378034 TNNT3P45378 269 aaPredicted RBP13.3□□□□□ -0.28
CKAP2-202ENST00000378034 GEMP55040 296 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 OVGP1Q12889 678 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 P3H1Q32P28 736 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 DCLK2Q8N568 766 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 FAM71DQ8N9W8 422 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 IFT43Q96FT9 208 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 TRIB3Q96RU7 358 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 SRPK1Q96SB4 655 aaKnown RBP13.3□□□□□ -0.28
CKAP2-202ENST00000378034 ZDHHC5Q9C0B5 715 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 CAPN10Q9HC96 672 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 PARD6AQ9NPB6 346 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 B4GALT6Q9UBX8 382 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 HS3ST3A1Q9Y663 406 aa13.3□□□□□ -0.28
CKAP2-202ENST00000378034 GPR179Q6PRD1 2367 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 PSMD11O00231 422 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 SLC31A1O15431 190 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 MMP20O60882 483 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 NDST3O95803 873 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 MT-CYBP00156 380 aaPredicted RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 ELFN1P0C7U0 828 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 LIG3P49916 1009 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 RALGDSQ12967 914 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 STAT4Q14765 748 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 PARP6Q2NL67 630 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 LIPIQ6XZB0 460 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 PRR23CQ6ZRP0 262 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 ARHGEF18Q6ZSZ5 1173 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 RAVER1Q8IY67 606 aaKnown RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 C12orf50Q8NA57 414 aaPredicted RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 TMEM145Q8NBT3 493 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 LPCAT1Q8NF37 534 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 CCDC110Q8TBZ0 833 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 COG1Q8WTW3 980 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 LRRC45Q96CN5 670 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 LYSMD1Q96S90 227 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 WRAP53Q9BUR4 548 aaKnown RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 DMDP11532 3685 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 LOC285095A0A1B0GVY8 99 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 CAPN8A6NHC0 703 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 VILLO15195 856 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 MAGEC1O60732 1142 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 PMPCBO75439 489 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 PAK4O96013 591 aaPredicted RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 PRKCGP05129 697 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 CFIP05156 583 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 SYPP08247 313 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 C6P13671 934 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 ZNF30P17039 623 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 CD38P28907 300 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 ACTN2P35609 894 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 HNF1BP35680 557 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 WNT3AP56704 352 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 SNX1Q13596 522 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 FGL2Q14314 439 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 QPCTQ16769 361 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 ALYREFQ86V81 257 aaKnown RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 KLHDC8BQ8IXV7 354 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 MFSD2AQ8NA29 543 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 KLK6Q92876 244 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 RMDN1Q96DB5 314 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 MLPHQ9BV36 600 aaPredicted RBP13.29□□□□□ -0.28
CKAP2-202ENST00000378034 AASDHPPTQ9NRN7 309 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
CKAP2-202ENST00000378034 A0A1W2PR77 199 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 PATE3B3GLJ2 98 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 TOR1BO14657 336 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 LZTS3O60299 673 aaPredicted RBP13.28□□□□□ -0.28
CKAP2-202ENST00000378034 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
CKAP2-202ENST00000378034 GDF10P55107 478 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
CKAP2-202ENST00000378034 LMNB2Q03252 620 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 CCDC6Q16204 474 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 PCSK7Q16549 785 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms