RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 MRPL40Q9NQ50 206 aaKnown RBP18.08■□□□□ 0.48
GNE-201ENST00000377902 TREX1Q9NSU2 369 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 SQORQ9Y6N5 450 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 COL1A2P08123 1366 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 FAM155AB1AL88 458 aaPredicted RBP18.07■□□□□ 0.48
GNE-201ENST00000377902 BMP10O95393 424 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 MT-ND1P03886 318 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 HLA-DQB2P05538 268 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 MAPK10P53779 464 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 SLC5A3P53794 718 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 FAM45BPQ6NSW5 357 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 DEFB132Q7Z7B7 95 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 ARHGAP12Q8IWW6 846 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 BBS5Q8N3I7 341 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 FAM45AQ8TCE6 357 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 MIPOL1Q8TD10 442 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 CYGBQ8WWM9 190 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 AKTIPQ9H8T0 292 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 RALGAPA2Q2PPJ7 1873 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 TTC24A2A3L6 582 aaPredicted RBP18.07■□□□□ 0.48
GNE-201ENST00000377902 BOLA2-SMG1P6H3BVE0 249 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 CACNG3O60359 315 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 YAP1P46937 504 aaKnown RBP18.07■□□□□ 0.48
GNE-201ENST00000377902 FOXA1P55317 472 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 TUBA4AP68366 448 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 POU4F1Q01851 419 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 PMS2P3Q13401 168 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 INTS6LQ5JSJ4 861 aaKnown RBP18.07■□□□□ 0.48
GNE-201ENST00000377902 GPR158Q5T848 1215 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 ANKRD23Q86SG2 305 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 LZTR1Q8N653 840 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 HM13Q8TCT9 377 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 DNAJB3Q8WWF6 145 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 DUS3LQ96G46 650 aaKnown RBP18.07■□□□□ 0.48
GNE-201ENST00000377902 OSBPL6Q9BZF3 934 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 UPF3AQ9H1J1 476 aaKnown RBP18.07■□□□□ 0.48
GNE-201ENST00000377902 EML4Q9HC35 981 aaKnown RBP18.07■□□□□ 0.48
GNE-201ENST00000377902 ZNF711Q9Y462 761 aa18.07■□□□□ 0.48
GNE-201ENST00000377902 A0A0J9YYE9 177 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 MTHFD1P11586 935 aaKnown RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 DARSP14868 501 aaKnown RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 CD247P20963 164 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 GPX3P22352 226 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 PNPLA4P41247 253 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 GRB7Q14451 532 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 CMTR2Q8IYT2 770 aaKnown RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 ATPAF2Q8N5M1 289 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 MRGPRX2Q96LB1 330 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 BIRC8Q96P09 236 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 ADI1Q9BV57 179 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 SLC39A8Q9C0K1 460 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 OAZ3Q9UMX2 235 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 CLEC11AQ9Y240 323 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 RNF103-CHMP3A0A140T963 221 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 OR51F1A6NGY5 319 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 MAFKO60675 156 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 SIX3O95343 332 aaPredicted RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 LTA4HP09960 611 aaKnown RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 SMPD1P17405 629 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 CAPN3P20807 821 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 ADRA1AP35348 466 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 CXCR3P49682 368 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 AIF1P55008 147 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 CDKN2DP55273 166 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 SH3BP2P78314 561 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 MERTKQ12866 999 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 FBXO48Q5FWF7 155 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 UBXN11Q5T124 520 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 ACBD5Q5T8D3 534 aaPredicted RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 GPR107Q5VW38 600 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 LYSMD3Q7Z3D4 306 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 IFNEQ86WN2 208 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 OR52K2Q8NGK3 314 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 FCRL5Q96RD9 977 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 KCNA7Q96RP8 456 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 CCM2LQ9NUG4 571 aaPredicted RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 ARMC1Q9NVT9 282 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.06■□□□□ 0.48
GNE-201ENST00000377902 NEU3Q9UQ49 428 aa18.06■□□□□ 0.48
GNE-201ENST00000377902 MMP3P08254 477 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 IMPDH2P12268 514 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 CES1P23141 567 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 PSMD7P51665 324 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 AGAP9Q5VTM2 703 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 PM20D1Q6GTS8 502 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 XKR5Q6UX68 686 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 ZNF554Q86TJ5 538 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 SLC15A3Q8IY34 581 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 RYBPQ8N488 228 aaPredicted RBP18.05■□□□□ 0.48
GNE-201ENST00000377902 TOP6BLQ8N6T0 577 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 LZICQ8WZA0 190 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 C19orf60Q96EN9 201 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 NPLQ9BXD5 320 aaPredicted RBP18.05■□□□□ 0.48
GNE-201ENST00000377902 RBM22Q9NW64 420 aaKnown RBP eCLIP18.05■□□□□ 0.48
GNE-201ENST00000377902 IPPQ9Y573 584 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 DHRS12A0PJE2 317 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 PTGESO14684 152 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 PSMD5Q16401 504 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 ZBED5Q49AG3 693 aa18.05■□□□□ 0.48
GNE-201ENST00000377902 PLEKHG4BQ96PX9 1271 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms