RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CLEC4MQ9H2X3 399 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 KIF17Q9P2E2 1029 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NDUFS1P28331 727 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 C8orf37Q96NL8 207 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM131LA2VDJ0 1609 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CNTN5O94779 1100 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CHSY3Q70JA7 882 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ENTPD4Q9Y227 616 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ADRB2P07550 413 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NAT2P11245 290 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NCAM1P13591 858 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ITGA4P13612 1032 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 FAUP35544 74 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 PTGES3Q15185 160 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 UBE2SQ16763 222 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SYT16Q17RD7 645 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 HEATR4Q86WZ0 1026 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GPR150Q8NGU9 434 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 IARS2Q9NSE4 1012 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM17Q9Y577 477 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NCK2O43639 380 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SERPINA3P01011 423 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 VEZF1Q14119 521 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GRM2Q14416 872 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ANKRD22Q5VYY1 191 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 BNIPLQ7Z465 357 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SLC22A17Q8WUG5 538 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 TDRD3Q9H7E2 651 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ANKRD33BA6NCL7 494 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 FAM155AB1AL88 458 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SNNO75324 88 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 EDN1P05305 212 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ITGB5P18084 799 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NFKB2Q00653 900 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CYP51A1Q16850 503 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SLX4IPQ5VYV7 408 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 VMP1Q96GC9 406 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RNPEPQ9H4A4 650 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 HSD17B1P14061 328 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 IVDP26440 423 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 TCF7P36402 384 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ARFIP1P53367 373 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RIN2Q8WYP3 895 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 KCNJ9Q92806 393 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 IL1RAPQ9NPH3 570 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 MATN4O95460 622 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 HTR1EP28566 365 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 MRPL19P49406 292 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CASP4P49662 377 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RBFAQ8N0V3 343 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 C1orf52Q8N6N3 182 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SETD4Q9NVD3 440 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GULP1Q9UBP9 304 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 AFF4Q9UHB7 1163 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SLC9A8Q9Y2E8 581 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 LTBP3Q9NS15 1303 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GPR89AB7ZAQ6 455 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GPR89BP0CG08 455 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NRIP1P48552 1158 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CASP12Q6UXS9 341 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 METTL6Q8TCB7 284 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SMPD3Q9NY59 655 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RNF112Q9ULX5 631 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 E9PCH4 1651 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 PSMD11O00231 422 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 HDAC2Q92769 488 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SPATC1LQ9H0A9 340 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 A8MVJ9 347 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CD58P19256 250 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 STEAP4Q687X5 459 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF112Q9UJU3 913 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 YBX3P16989 372 aaKnown RBP eCLIP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 MYL12AP19105 171 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RYKP34925 604 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 KCNJ1P48048 391 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 DDX1Q92499 740 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CELF4Q9BZC1 486 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RAB23Q9ULC3 237 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GMPRP36959 345 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 RPL13AP3Q6NVV1 102 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 DQX1Q8TE96 717 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 FAM126AQ9BYI3 521 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 AZIN1O14977 448 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ENTPD5O75356 428 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 RAG1P15918 1043 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 HNF4AP41235 474 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF211Q13398 564 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ARL6IP1Q15041 203 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CHFRQ96EP1 664 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 FAM172BPA6NC97 362 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 OCM2P0CE71 109 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 OCMP0CE72 109 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 EMX2Q04743 252 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PTPROQ16827 1216 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ATG9BQ674R7 924 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 MARCH10Q8NA82 808 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 OTUB2Q96DC9 234 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PAK6Q9NQU5 681 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms