RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 GPSM1Q86YR5 675 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 CFAP206Q8IYR0 622 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 AHI1Q8N157 1196 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 ZCCHC9Q8N567 271 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 ITFG1Q8TB96 612 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 NTAN1Q96AB6 310 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 SGSM3Q96HU1 749 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 EBNA1BP2Q99848 306 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 ILKAPQ9H0C8 392 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 MANSC1Q9H8J5 431 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 PNPLA8Q9NP80 782 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 HPS4Q9NQG7 708 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 CDH7Q9ULB5 785 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 CEP250Q9BV73 2442 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 PSMD12O00232 456 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 ANGPT2O15123 496 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 MMP20O60882 483 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 ASLP04424 464 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 TNNI3P19429 210 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 DGKAP23743 735 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 GDF10P55107 478 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 SATB1Q01826 763 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 DSC3Q14574 896 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 FBXO48Q5FWF7 155 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 AFTPHQ6ULP2 937 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 ZCCHC23Q6ZST2 131 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 RPAINQ86UA6 219 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 PHYKPLQ8IUZ5 450 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 LRRC57Q8N9N7 239 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 TXNDC5Q8NBS9 432 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 METTL6Q8TCB7 284 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 DDX1Q92499 740 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 SDCCAG3Q96C92 435 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 TEKT5Q96M29 485 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 DNAJC28Q9NX36 388 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 EPS15L1Q9UBC2 864 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 FKBPLQ9UIM3 349 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 TAF1LQ8IZX4 1826 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 ATG2BQ96BY7 2078 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 PAPPA2Q9BXP8 1791 aa8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 COL5A3P25940 1745 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-202ENST00000377340 C2orf71A6NGG8 1288 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 GYG2O15488 501 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 TULP3O75386 442 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 TM7SF2O76062 418 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 RPN2P04844 631 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 SOX9P48436 509 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 IRF8Q02556 426 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 NR6A1Q15406 480 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 PITRM1Q5JRX3 1037 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 FAM109BQ6ICB4 259 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ESRP1Q6NXG1 681 aaKnown RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 RAVER1Q8IY67 606 aaKnown RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CD101Q93033 1021 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 IGSF8Q969P0 613 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 SLC46A2Q9BY10 475 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 PPCSQ9HAB8 311 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 NOD2Q9HC29 1040 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 NCKIPSDQ9NZQ3 722 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 MAP10Q9P2G4 905 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 VPS51Q9UID3 782 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CYP8B1Q9UNU6 501 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 SHANK3Q9BYB0 1731 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 H0Y858 1186 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 PRMT5O14744 637 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 EIF3HO15372 352 aaKnown RBP eCLIP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ATG13O75143 517 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 VIPP01282 170 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ENO3P13929 434 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 GNSP15586 552 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 AMZ1Q400G9 498 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ENPP7Q6UWV6 458 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 GDPD4Q6W3E5 623 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 TMC3Q7Z5M5 1100 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CMC1Q7Z7K0 106 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 SETD3Q86TU7 594 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CMASQ8NFW8 434 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 FAM126AQ9BYI3 521 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 WWP1Q9H0M0 922 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CAB39LQ9H9S4 337 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 PCYOX1Q9UHG3 505 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 FAM186AA6NE01 2351 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CPED1A4D0V7 1026 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 MGAT4DA6NG13 374 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 SPECC1L-ADORA2AF8WAN1 911 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 FFAR2O15552 330 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 LAMTOR5O43504 91 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 TFEBP19484 476 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ACTR1BP42025 376 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ACTR1AP61163 376 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 IFI35P80217 286 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 GRTP1Q5TC63 336 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ANKS6Q68DC2 871 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 ARHGAP36Q6ZRI8 547 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 GALNT13Q8IUC8 556 aa8.49□□□□□ -1.05
CRNKL1-202ENST00000377340 CPNE1Q99829 537 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms