RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 CHKBQ9Y259 395 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 EFR3BQ9Y2G0 817 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 NPIPB15A6NHN6 443 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-202ENST00000375618 GOLGA8CPA6NN73 597 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 APOC4-APOC2K7ER74 178 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 GIPC1O14908 333 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 OPHN1O60890 802 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 TM7SF2O76062 418 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 APOC2P02655 101 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 ALPIP09923 528 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 CD86P42081 329 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 SGCGQ13326 291 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 KLF1Q13351 362 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-202ENST00000375618 WSCD2Q2TBF2 565 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 TEX44Q53QW1 395 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 ARMC12Q5T9G4 340 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 ERAP2Q6P179 960 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 LIPIQ6XZB0 460 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 PIP4P1Q86T03 277 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 TSPAN33Q86UF1 283 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 IQCHQ86VS3 1027 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 PELI3Q8N2H9 469 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 IMP4Q96G21 291 aaKnown RBP16.05■□□□□ 0.16
C11orf88-202ENST00000375618 CAMK1GQ96NX5 476 aa16.05■□□□□ 0.16
C11orf88-202ENST00000375618 MCCC1Q96RQ3 725 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-202ENST00000375618 RBM15Q96T37 977 aaKnown RBP eCLIP16.05■□□□□ 0.16
C11orf88-202ENST00000375618 R3HDM2Q9Y2K5 976 aaKnown RBP16.05■□□□□ 0.16
C11orf88-202ENST00000375618 ASCC3Q8N3C0 2202 aaKnown RBP16.04■□□□□ 0.16
C11orf88-202ENST00000375618 F5H423 210 aaPredicted RBP16.04■□□□□ 0.16
C11orf88-202ENST00000375618 CER1O95813 267 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 THEGLP0DJG4 465 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 RBL1P28749 1068 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 PFN3P60673 137 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 IRF4Q15306 451 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 CNGA3Q16281 694 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 SLC45A4Q5BKX6 768 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 MEI1Q5TIA1 1274 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 IL27RAQ6UWB1 636 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 KYAT3Q6YP21 454 aaKnown RBP16.04■□□□□ 0.16
C11orf88-202ENST00000375618 Q6ZSR6 202 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 RFLNAQ6ZTI6 216 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 NYAP1Q6ZVC0 841 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 ZSCAN30Q86W11 494 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 ZNF567Q8N184 647 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 CBARPQ8N350 705 aaPredicted RBP16.04■□□□□ 0.16
C11orf88-202ENST00000375618 UBL4BQ8N7F7 174 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 PAF1Q8N7H5 531 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 SPATA22Q8NHS9 363 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 FUBP1Q96AE4 644 aaKnown RBP16.04■□□□□ 0.16
C11orf88-202ENST00000375618 KLHDC7BQ96G42 594 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 TEKT5Q96M29 485 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 TRIB3Q96RU7 358 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 ELF4Q99607 663 aaPredicted RBP16.04■□□□□ 0.16
C11orf88-202ENST00000375618 GLOD4Q9HC38 313 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 TM7SF3Q9NS93 570 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 PHTF1Q9UMS5 762 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 BTBD3Q9Y2F9 522 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 PPIL1Q9Y3C6 166 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 HS3ST3A1Q9Y663 406 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 SPTBN4Q9H254 2564 aa16.04■□□□□ 0.16
C11orf88-202ENST00000375618 A0A1B0GTQ1 180 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 A6NNZ2 444 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 SH3BP5O60239 455 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 NEBLO76041 1014 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 RECQL5O94762 991 aaPredicted RBP16.03■□□□□ 0.16
C11orf88-202ENST00000375618 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
C11orf88-202ENST00000375618 MT-CYBP00156 380 aaPredicted RBP16.03■□□□□ 0.16
C11orf88-202ENST00000375618 SDHBP21912 280 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 VIPR1P32241 457 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 HNF1BP35680 557 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 POLR2LP62875 67 aaKnown RBP16.03■□□□□ 0.16
C11orf88-202ENST00000375618 XRCC4Q13426 336 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 BZW1Q7L1Q6 419 aaKnown RBP16.03■□□□□ 0.16
C11orf88-202ENST00000375618 HSD11B1LQ7Z5J1 315 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 PTAR1Q7Z6K3 402 aaPredicted RBP16.03■□□□□ 0.16
C11orf88-202ENST00000375618 REXO1L1PQ8IX06 675 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 PLA2G15Q8NCC3 412 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 DENND6BQ8NEG7 585 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 DEFB124Q8NES8 71 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 HTR3CQ8WXA8 447 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 SCRN2Q96FV2 425 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 COQ10AQ96MF6 247 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 GORASP1Q9BQQ3 440 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 SLC25A51Q9H1U9 297 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 GDF3Q9NR23 364 aa16.03■□□□□ 0.16
C11orf88-202ENST00000375618 PNMA8BQ9ULN7 279 aaPredicted RBP16.03■□□□□ 0.16
C11orf88-202ENST00000375618 KNL1Q8NG31 2342 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 A0A1W2PQ67 120 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 HACD1B0YJ81 288 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 H7C0C1 242 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 TJP3O95049 919 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 ZNF883P0CG24 379 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 NFKB1P19838 968 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 CES1P23141 567 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 ATP5OP48047 213 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 EIF3EP60228 445 aaKnown RBP16.02■□□□□ 0.16
C11orf88-202ENST00000375618 OVGP1Q12889 678 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 FZD2Q14332 565 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 AGERQ15109 404 aa16.02■□□□□ 0.16
C11orf88-202ENST00000375618 CDKN3Q16667 212 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms