RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 ZFP28Q8NHY6 868 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 PAIP2BQ9ULR5 123 aaKnown RBP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 SMIM35A0A1B0GVV1 85 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 FZD9O00144 591 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 DENRO43583 198 aaKnown RBP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 SYNCRIPO60506 623 aaKnown RBP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 SLC7A1P30825 629 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 BRCC3P46736 316 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 POLD2P49005 469 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 TBX4P57082 545 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 RHDQ02161 417 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 PIGGQ5H8A4 983 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 UGT2A3Q6UWM9 527 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 PATL1Q86TB9 770 aaKnown RBP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 NPWQ8N729 165 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 SLC39A8Q9C0K1 460 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 UXTQ9UBK9 157 aaPredicted RBP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 C1orf232A0A0U1RR37 186 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 RAMP2O60895 175 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 GALNT2Q10471 571 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 TUBB3Q13509 450 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 FAM45BPQ6NSW5 357 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 FAM45AQ8TCE6 357 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 KBTBD7Q8WVZ9 684 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 ASB2Q96Q27 587 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PLGRKTQ9HBL7 147 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.19□□□□□ -0.3
CUL4A-203ENST00000375441 BLOC1S6Q9UL45 172 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 A8MT66 165 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PDLIM1O00151 329 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 SDHDO14521 159 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 MATN3O15232 486 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 GRID2O43424 1007 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 CLCNKBP51801 687 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PLCL1Q15111 1095 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PPP1R3AQ16821 1122 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PKDCCQ504Y2 493 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 SERPINB11Q96P15 392 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 TAS2R13Q9NYV9 303 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 BTN3A1O00481 513 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PIRO00625 290 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 VPS26AO75436 327 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 ZNF157P51786 506 aaPredicted RBP13.19□□□□□ -0.3
CUL4A-203ENST00000375441 ARHGDIAP52565 204 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 C21orf59P57076 290 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 ABRAXAS1Q6UWZ7 409 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 ARHGAP36Q6ZRI8 547 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 CEP97Q8IW35 865 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 FCRL5Q96RD9 977 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
CUL4A-203ENST00000375441 KIFC1Q9BW19 673 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 FBRSL1Q9HCM7 1045 aaKnown RBP13.19□□□□□ -0.3
CUL4A-203ENST00000375441 PLK2Q9NYY3 685 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 CNOT6Q9ULM6 557 aaKnown RBP13.19□□□□□ -0.3
CUL4A-203ENST00000375441 FADS3Q9Y5Q0 445 aa13.19□□□□□ -0.3
CUL4A-203ENST00000375441 SLC12A8A0AV02 714 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 OR1G1P47890 313 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 FOXD4Q12950 439 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 POLD3Q15054 466 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 NR6A1Q15406 480 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 KIAA0408Q6ZU52 694 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 OFCC1Q8IZS5 231 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 KCTD13Q8WZ19 329 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 KCNN1Q92952 543 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 HOPXQ9BPY8 73 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 C1orf50Q9BV19 199 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SUCOQ9UBS9 1254 aaKnown RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 H3BNX3 289 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 BCL10O95999 233 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SERPINF2P08697 491 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 OR1E1P30953 314 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 HCAR3P49019 387 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SCNN1BP51168 640 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 CRYBB1P53674 252 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SOX4Q06945 474 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 BNIP2Q12982 314 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 IKBKEQ14164 716 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 ACAP2Q15057 778 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 CROCCP3Q8IVE0 287 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 ZC3H15Q8WU90 426 aaKnown RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 TBATAQ96M53 351 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SEMA3CQ99985 751 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 C16orf70Q9BSU1 422 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 HGH1Q9BTY7 390 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 TIMM22Q9Y584 194 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 C9IYK1 514 aa13.18□□□□□ -0.3
CUL4A-203ENST00000375441 STX7O15400 261 aaKnown RBP13.18□□□□□ -0.3
CUL4A-203ENST00000375441 BNIP3LO60238 219 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms