RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SH3GL2Q99962 352 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 TBCDQ9BTW9 1192 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 STRA6Q9BX79 667 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 MAGEH1Q9H213 219 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 CYTH4Q9UIA0 394 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 PADI4Q9UM07 663 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 HBS1LQ9Y450 684 aaKnown RBP18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 YIPF1Q9Y548 306 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 SNX8Q9Y5X2 465 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 GNRH1P01148 92 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 CHRNA1P02708 482 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 ELFN1P0C7U0 828 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 MAPK1P28482 360 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 FBXW4P57775 412 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 FSTL4Q6MZW2 842 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 C15orf39Q6ZRI6 1047 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 GNPTGQ9UJJ9 305 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 PRMT5O14744 637 aaPredicted RBP18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 CHI3L1P36222 383 aaPredicted RBP18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 MAPK9P45984 424 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 CDH4P55283 916 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 PPP1R16AQ96I34 528 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 CNBD2Q96M20 576 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 TLL2Q9Y6L7 1015 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 H3BMM5 538 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 CAPN15O75808 1086 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 SH3BGRP55822 239 aaPredicted RBP18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 LIPMQ5VYY2 423 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF555Q8NEP9 628 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 BRD9Q9H8M2 597 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 WDR41Q9HAD4 459 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 CIDEBQ9UHD4 219 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 NCKAP1Q9Y2A7 1128 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 PIK3CGP48736 1102 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 HPCAP84074 193 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 PWP1Q13610 501 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 HECTD2Q5U5R9 776 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 PPP4R4Q6NUP7 873 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 TBC1D10AQ9BXI6 508 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 CHCHD3Q9NX63 227 aaKnown RBP18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 ENPP3O14638 875 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 EDN1P05305 212 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 HGFP14210 728 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 ATP6V1B2P21281 511 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 INPP1P49441 399 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 MLLT6P55198 1093 aaPredicted RBP18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 TRMT5Q32P41 509 aaKnown RBP18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 LRRC23Q53EV4 343 aaPredicted RBP18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 PPP1R15BQ5SWA1 713 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 CRTC3Q6UUV7 619 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 ARCQ7LC44 396 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 FIG4Q92562 907 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 GFM2Q969S9 779 aaKnown RBP18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 OTUB1Q96FW1 271 aaPredicted RBP18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF556Q9HAH1 456 aa18.02■□□□□ 0.48
PTPDC1-202ENST00000375360 LTBP4Q8N2S1 1624 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 CCDC154A6NI56 674 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 NTRK1P04629 796 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 LBPP18428 481 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 CBX2Q14781 532 aaPredicted RBP18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 NTAN1Q96AB6 310 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 C1orf50Q9BV19 199 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 GPR62Q9BZJ7 368 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 TRPC4Q9UBN4 977 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 CD84Q9UIB8 345 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 FBXL21Q9UKT6 434 aa18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 TNPO3Q9Y5L0 923 aaKnown RBP18.02■□□□□ 0.47
PTPDC1-202ENST00000375360 J3KR12 359 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 USP1O94782 785 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 PKMP14618 531 aaKnown RBP18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 HAPLN3Q96S86 360 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 TCAF1Q9Y4C2 921 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 C1QTNF3-AMACRE9PGA6 284 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 TK2O00142 265 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ACVRL1P37023 503 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 KPNB1Q14974 876 aaKnown RBP18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 RAB6CQ53S08 254 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 OTUD3Q5T2D3 398 aaPredicted RBP18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 NAT8LQ8N9F0 302 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 NPY6RQ99463 290 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 GPR21Q99679 349 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 RAB6CQ9H0N0 254 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 C11orf49Q9H6J7 331 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 TMEM59LQ9UK28 342 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 TLR6Q9Y2C9 796 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 RAP2CQ9Y3L5 183 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 OR51F1A6NGY5 319 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 INSIG1O15503 277 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 RPP40O75818 363 aaKnown RBP18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ATP6V1G2O95670 118 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ALBP02768 609 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 MPSTP25325 297 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 LRPAP1P30533 357 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 CXCR3P49682 368 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ACBD5Q5T8D3 534 aaPredicted RBP18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ZNF621Q6ZSS3 439 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 CHST9Q7L1S5 443 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 KCTD13Q8WZ19 329 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms